Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq1215 123 4e-23 >seq1215 Length=5034626 Score = 123 bits (136), Expect = 4e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 214001 ATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTTACGAA 214060 ||||| || || || || || || || |||| ||| | | ||| | ||| | ||| Sbjct 1833288 ATTGATGGAGAGGTGTATCCCCCCACAGTCAGGGACACTCAGGTGGAGATGATCTACCCG 1833347 Query 214061 CCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCC 214120 || ||| || || | | || || || |||| | ||| |||| || || ||||| Sbjct 1833348 CCTCACGTCCCTGAGCACCTGCGGTTTGCTGTGGGCCAGGAGGTGTTCGGCCTGGTGCCT 1833407 Query 214121 GGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTG 214180 ||| ||||| ||||||||| ||||||||| |||| |||||||| || ||||||||||| Sbjct 1833408 GGTCTCATGATGTACGCCACGATCTGGCTGCGAGAACACAACAGAGTGTGCGACGTGCTT 1833467 Query 214181 AAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGATCA 214226 || || |||||||| || ||| | || || | ||| ||||||| || Sbjct 1833468 AAGCAGGAGCACCCAGAGTGGGATGATGAGCGGCTCTTCCAGACCA 1833513 Score = 84.2 bits (92), Expect = 3e-11 Identities = 186/279 (67%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 214601 AGGGAAGGAGATAGCTGTCGAGCTGGAGGCCTTCTACGGTGATATCGAAGCCGTCGAACT 214660 || |||||| || |||| ||| | || || |||| ||||| || || ||| | || || Sbjct 1834771 AGAGAAGGAAATGGCTGCGGAGTTAGAAGCACTCTATGGTGACATTGACGCCATGGAGCT 1834830 Query 214661 CTACGCTGATTTCCTCGCTGAAAAACCGTGTCCCGATGCCATCCTCGGTGACGGCGTCCT 214720 ||| ||| | || | ||||| || | |||||||||||| | ||||| | | | Sbjct 1834831 GTACCCTGCCCTTCTGGTGGAAAAGCCTCGCCCCGATGCCATCTTTGGTGAGACCATGGT 1834890 Query 214721 CGAGTCGGGGGCTCCGTTCTCCCTGAGGGGACTCGCGGCGAACGTCATCTGCTCCCCGGG 214780 || || ||||| ||||| ||| ||||| || ||| ||| || || || Sbjct 1834891 AGAACTCGGAGCTCCTTTCTCTTTGAAAGGACTGATGGGCAACCCCATATGTTCTCCTCA 1834950 Query 214781 CTACTGGAAACGCAACACACTCGGTAGCTCCGCGAGTTTCAACATCGTGAGGAGCGCGAC 214840 ||||||||| | || ||| | ||| | | | |||| || ||| | | | || | Sbjct 1834951 CTACTGGAAGCCCAGCACTTTTGGTGGAGAAGTGGGTTTTAAAATCATCAACACTGCCTC 1835010 Query 214841 CCTTCAGTCTCTCATCTGTAGCAACGTCAAGGGATGTCC 214879 | |||||||||||||||| | ||||| || || || || Sbjct 1835011 CATTCAGTCTCTCATCTGCAATAACGTGAAAGGCTGCCC 1835049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723329326006560