Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq366 138 2e-27 seq981 118 1e-21 seq353 104 3e-17 >seq366 Length=2959005 Score = 138 bits (152), Expect = 2e-27 Identities = 112/136 (82%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| ||||| | |||||| ||||| ||||| |||||||| || || ||||| | Sbjct 58966 CCTCATCTCTGCTAATGAGTTCGTTGGAAAACGTGAGGCCAGGCATCAGTCCCCGCTTCT 59025 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| || || | |||||||| |||||||||||||||||||| || || ||||| | Sbjct 59026 TGAGCCAGAAAATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACCGCAGCAAAAG 59085 Query 39759 CAACAAGTCTCTCTCC 39774 | |||| | |||||| Sbjct 59086 CTACAACACGCTCTCC 59101 >seq981 Length=171841 Score = 118 bits (130), Expect = 1e-21 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 |||||||| || || || ||||| |||||||| || || ||||| || ||||| | || Sbjct 76937 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTGTAAGGTTCAATGGAC 76996 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 ||||||||||||||||| |||||||| || ||||| ||||| || || | | |||||| Sbjct 76997 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAAGAAGTAAACTG 77056 Query 68839 TTTCTAAGACCAT 68851 ||||| | ||||| Sbjct 77057 TTTCTTATACCAT 77069 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390 || |||| |||| ||| |||||||| ||||| || || || | || || | ||||| | Sbjct 107600 CACCACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCGTGCTGCCA 107659 Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450 |||| ||||||||||| || | ||||| | || || ||| |||| ||||| || |||| Sbjct 107660 GAATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCCGCTGTTTCAGCAGCCAAAGTAT 107719 Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 ||| ||| | ||| || || || | |||| ||||| || |||||||||| Sbjct 107720 CTAGTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 107770 Score = 100 bits (110), Expect = 4e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 69315 ATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATT 69374 ||||| || ||| ||||| || || || ||||||||||| || ||||| || ||||| || Sbjct 93220 ATATTCTACTATTTCTGTGCACAGGTTGCTACATTTGATCGTTCCCAGGTTCTGCTGGTT 93279 Query 69375 ACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGA 69434 ||||| ||||||| || |||||||| || |||| ||||| || || ||||||| Sbjct 93280 GCTCTTCCGATTACAGGAATCTTTGTAAAGCATGTACGGGGTACCTGTCTCTGTCTGAGA 93339 Query 69435 TTCGATAATAGATTTCCAAA 69454 || ||||| | | ||||| Sbjct 93340 CTCAATAATGGCATACCAAA 93359 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 ||||||||||| || ||||| ||||||||||| || | || || || |||| | | | Sbjct 94559 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 94618 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| |||||||| || || || | ||| |||||||| | || || ||||||| || Sbjct 94619 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 94678 Query 69715 TCTAGATATATCGC 69728 || || || || || Sbjct 94679 TCCAGGTAAATAGC 94692 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 || || ||||| || | || ||||| || || || ||||| | |||||||| || ||| Sbjct 102474 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 102533 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 |||||||||||||| | |||||||| | ||||| || | | || | ||||||| Sbjct 102534 TATGTTTCAATAGCAGCATCTATATCTTCTTTGTGAATCCCCACAGATACCCTCATCAAC 102593 Query 70111 ATATGCTGAGGTCGTTC 70127 ||||| || |||| ||| Sbjct 102594 ATATGTTGTGGTCTTTC 102610 >seq353 Length=3050693 Score = 104 bits (114), Expect = 3e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || || | ||| || ||||| |||||||||||||| ||||| | || || Sbjct 2773741 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 2773800 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 | ||| ||||| |||||||| ||||| || ||||| | |||||||| || ||||| || Sbjct 2773801 AACCAGAATATAGCAGCAAACGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGGCC 2773860 Query 39761 AC 39762 || Sbjct 2773861 AC 2773862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686897903909160