Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22]
1,269 sequences; 1,803,099,001 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq353 102 6e-17
seq366 89.7 4e-13
seq593 86.0 5e-12
>seq353
Length=3050693
Score = 102 bits (112), Expect = 6e-17
Identities = 97/124 (78%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194
|| || ||||| | ||| ||||| ||||||| || ||||||||||| || ||||| |||
Sbjct 2773862 GTGGCCTTTGCTGCTGTAGAAGGAGTTTTCTTCTCGGGATCGTTTGCTGCTATATTCTGG 2773803
Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254
||||||||| ||||| | |||||||| | || ||||| ||||| | || || | |||
Sbjct 2773802 TTAAAGAAAAGAGGTCTTATGCCTGGACTCACCTTTTCCAATGAACTCATCAGCAGAGAT 2773743
Query 44255 GAAG 44258
||||
Sbjct 2773742 GAAG 2773739
Score = 89.7 bits (98), Expect = 4e-13
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552
|||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| |
Sbjct 2768448 AAAATCCCTTTGATTTTATGGAAAACATTTCTTTAGAAGGGAAAACAAATTTCTTTGAGA 2768389
Query 44553 AACGCGTTGGAGAATATCAGCG 44574
|||| ||| ||| ||||||||
Sbjct 2768388 AACGAGTTTCAGAGTATCAGCG 2768367
>seq366
Length=2959005
Score = 89.7 bits (98), Expect = 4e-13
Identities = 92/118 (78%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 43904 CGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962
|||||| || || ||||| || ||| || || || || || || || || ||||||||
Sbjct 60460 CGGTTTAGCCAGGAGGTTCAGATCACC-GAGGCCCGCTGCTTCTACGGCTTCCAAATTGC 60402
Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
||| ||||| || ||||| |||||||||||||| || || || || ||||| ||||||
Sbjct 60401 CATGGAAAACATACATTCTGAAATGTACAGTCTCCTCATTGACACCTACATTAAAGAT 60344
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182
||||| || |||| || ||||| | ||||||||||| |||||||| || || |||||
Sbjct 59101 GGAGAGCGTGTTGTAGCTTTTGCTGCGGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCA 59042
Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242
| || || ||| | ||||| || || |||||||||| | |||||||| || || |
Sbjct 59041 TCAATTTTCTGGCTCAAGAAGCGGGGACTGATGCCTGGCCTCACGTTTTCCAACGAACTC 58982
Query 44243 ATAAGTCGTGATGA 44256
|| || | |||||
Sbjct 58981 ATTAGCAGAGATGA 58968
>seq593
Length=7795800
Score = 86.0 bits (94), Expect = 5e-12
Identities = 115/160 (72%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 41045 TTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACT 41104
||| ||||| | || || || ||| | || ||||| || || ||||| || ||
Sbjct 5167123 TTTCATGGCCCTACCTCCATGCCATGCCCTTTGCCAGTTCTATGTGGTGAATGGCGAGCT 5167064
Query 41105 GTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGC 41164
||| || || |||| || || |||| |||||||||||||| || || || ||||| ||
Sbjct 5167063 GTCCTGCCAGCTGTACCAGAGGTCAGCAGACATGGGACTAGGCGTGCCCTTCAACATCGC 5167004
Query 41165 GAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACC 41204
|| || | |||||||| || ||||| |||||| | |||
Sbjct 5167003 CAGCTACTCCCTGCTCACCTACATGATCGCACACATCACC 5166964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397449852970345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |