Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq353 102 6e-17 seq366 89.7 4e-13 seq593 86.0 5e-12 >seq353 Length=3050693 Score = 102 bits (112), Expect = 6e-17 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194 || || ||||| | ||| ||||| ||||||| || ||||||||||| || ||||| ||| Sbjct 2773862 GTGGCCTTTGCTGCTGTAGAAGGAGTTTTCTTCTCGGGATCGTTTGCTGCTATATTCTGG 2773803 Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254 ||||||||| ||||| | |||||||| | || ||||| ||||| | || || | ||| Sbjct 2773802 TTAAAGAAAAGAGGTCTTATGCCTGGACTCACCTTTTCCAATGAACTCATCAGCAGAGAT 2773743 Query 44255 GAAG 44258 |||| Sbjct 2773742 GAAG 2773739 Score = 89.7 bits (98), Expect = 4e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| | Sbjct 2768448 AAAATCCCTTTGATTTTATGGAAAACATTTCTTTAGAAGGGAAAACAAATTTCTTTGAGA 2768389 Query 44553 AACGCGTTGGAGAATATCAGCG 44574 |||| ||| ||| |||||||| Sbjct 2768388 AACGAGTTTCAGAGTATCAGCG 2768367 >seq366 Length=2959005 Score = 89.7 bits (98), Expect = 4e-13 Identities = 92/118 (78%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 43904 CGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962 |||||| || || ||||| || ||| || || || || || || || || |||||||| Sbjct 60460 CGGTTTAGCCAGGAGGTTCAGATCACC-GAGGCCCGCTGCTTCTACGGCTTCCAAATTGC 60402 Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 ||| ||||| || ||||| |||||||||||||| || || || || ||||| |||||| Sbjct 60401 CATGGAAAACATACATTCTGAAATGTACAGTCTCCTCATTGACACCTACATTAAAGAT 60344 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 ||||| || |||| || ||||| | ||||||||||| |||||||| || || ||||| Sbjct 59101 GGAGAGCGTGTTGTAGCTTTTGCTGCGGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCA 59042 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 | || || ||| | ||||| || || |||||||||| | |||||||| || || | Sbjct 59041 TCAATTTTCTGGCTCAAGAAGCGGGGACTGATGCCTGGCCTCACGTTTTCCAACGAACTC 58982 Query 44243 ATAAGTCGTGATGA 44256 || || | ||||| Sbjct 58981 ATTAGCAGAGATGA 58968 >seq593 Length=7795800 Score = 86.0 bits (94), Expect = 5e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 41045 TTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACT 41104 ||| ||||| | || || || ||| | || ||||| || || ||||| || || Sbjct 5167123 TTTCATGGCCCTACCTCCATGCCATGCCCTTTGCCAGTTCTATGTGGTGAATGGCGAGCT 5167064 Query 41105 GTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGC 41164 ||| || || |||| || || |||| |||||||||||||| || || || ||||| || Sbjct 5167063 GTCCTGCCAGCTGTACCAGAGGTCAGCAGACATGGGACTAGGCGTGCCCTTCAACATCGC 5167004 Query 41165 GAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACC 41204 || || | |||||||| || ||||| |||||| | ||| Sbjct 5167003 CAGCTACTCCCTGCTCACCTACATGATCGCACACATCACC 5166964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397449852970345