Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22]
1,269 sequences; 1,803,099,001 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq360 100 3e-16
seq411 91.5 2e-13
seq366 89.7 6e-13
>seq360
Length=10456021
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|||||||||||||||| |||||||||||| ||||||||| ||| || || || || ||
Sbjct 4138866 GTGAAAATGTAACGAGGGCTTGCAGCATCTTTGCCACCATGAAGCCGAGTTCCAAACTGA 4138925
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | || | | | ||| | |||||| ||||||||||| |||||||| || |||
Sbjct 4138926 CCAATAGGTTGAAGCAAGTTAATGTTGTTACTTCCCACAAAGTTCTGAGCCAAATTCACA 4138985
Query 117425 ATCGT 117429
|| ||
Sbjct 4138986 ATAGT 4138990
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||| ||||| || | ||| || ||||| |||||||| ||||| |||||||||||
Sbjct 4138866 GTGAAAATGTAACGAGGGCTTGCAGCATCTTTGCCACCATGAAGCCGAGTTCCAAACTGA 4138925
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| || | || | ||| | |||||| ||||| || ||||||||||||||||||
Sbjct 4138926 CCAATAGGTTGAAGCAAGTTAATGTTGTTACTTCCCACAAAGTTCTGAGCCAAATTCACA 4138985
Query 152149 ATCGT 152153
|| ||
Sbjct 4138986 ATAGT 4138990
>seq411
Length=2523640
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
|||||||||||||| | || || | |||||||||||| ||||| || ||||||||
Sbjct 57564 GTGAAGATGTATCGAGGACTAGCAGAATCCTTGCCACCATGCAGCCTGGTACCAAACTGA 57505
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| ||| | | |||||| | || ||| ||||| ||||||||||||||||| | |
Sbjct 57504 CCAATGGGTTGTAAGAGGTTCAAATTATTGCTACCCACAAAATTCTGAGCCAAATTGATA 57445
Query 152149 ATCGT 152153
|| ||
Sbjct 57444 ATGGT 57440
Score = 86.0 bits (94), Expect = 7e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||| ||||| |||| || |||| ||||||||||||| || | ||||| || ||
Sbjct 57564 GTGAAGATGTATCGAGGACTAGCAGAATCCTTGCCACCATGCAGCCTGGTACCAAACTGA 57505
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | || | |||||||||| || ||| |||||||| || |||||||| |||| |
Sbjct 57504 CCAATGGGTTGTAAGAGGTTCAAATTATTGCTACCCACAAAATTCTGAGCCAAATTGATA 57445
Query 117425 ATCGT 117429
|| ||
Sbjct 57444 ATGGT 57440
>seq366
Length=2959005
Score = 89.7 bits (98), Expect = 6e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| || | ||| || ||||||| ||||||||||| ||||| ||||||||
Sbjct 58968 TCATCTCTGCTAATGAGTTCGTTGGAAAACGTGAGGCCAGGCATCAGTCCCCGCTTCTTG 59027
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
| ||| || || | || |||||| |||||||||||||| || ||||| ||
Sbjct 59028 AGCCAGAAAATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACCGCAGCAAAAGCT 59087
Query 74892 ACAA 74895
||||
Sbjct 59088 ACAA 59091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547207319786200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |