Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq382 210 2e-49 seq1093 118 9e-22 seq593 95.1 1e-14 >seq382 Length=20934477 Score = 210 bits (232), Expect = 2e-49 Identities = 209/271 (77%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 1260 TGTTTTTTAGAAACGCCACAAGAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCA 1319 || ||| | ||||| | | ||||| | ||||| |||||||| ||| | || || ||| Sbjct 1091343 TGCTTTCTGGAAACTTCCGAGGAAGTCCTGATTGTGACATGGCAGAAAATGAAGGCTTCA 1091402 Query 1320 AGCCCAGAAAACATGGCCACTTTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATAC 1379 |||||||| ||||||| |||||| || || || || |||||||| | ||||| || || Sbjct 1091403 AGCCCAGACAACATGGTCACTTTCAGCAAGGATCATGGGGTTGTGCTCCAGCCGGCCTAT 1091462 Query 1380 AAAGATAAAATGAACATAACTGAGCTTGGACTACAAAACACAACTATAACCTTCTGGAAC 1439 || ||||| ||||||||||||||||| ||||| | |||||||| || ||||||||||| Sbjct 1091463 AAGGATAAGATGAACATAACTGAGCTGGGACTTAAGAACACAACCATTACCTTCTGGAAT 1091522 Query 1440 ACAACATTGGATGATGAAGGGTGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAG 1499 || || |||| ||||| || || |||| ||| | || || || || || ||||||||| Sbjct 1091523 ACCACTCTGGACGATGAGGGTTGTTACACGTGCCTCTTCAATACCTTCGGTTCTGGGAAG 1091582 Query 1500 ATGTCAGGAATAGGGTGTCTAACCCTTTTTG 1530 || |||||| ||| || || ||||| |||| Sbjct 1091583 ATTTCAGGAGTAGCCTGCCTCACCCTCTTTG 1091613 >seq1093 Length=5597135 Score = 118 bits (130), Expect = 9e-22 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || ||||||||| | || ||||| ||||||||| | ||||| || ||||||||| Sbjct 5157839 GTGGTGGAGGAGCTCTTCAGGGACGGGGTGAACTGGGGGAGGATTGTGGCCTTCTTTGAG 5157780 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 || ||||| || ||||||||||| |||||||| | | || | |||| || |||||| Sbjct 5157779 TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAAC 5157720 Query 3365 ATTGCCGCGTGGATGACAGA 3384 || ||| ||||||||| || Sbjct 5157719 ATCGCCCTGTGGATGACGGA 5157700 >seq593 Length=7795800 Score = 95.1 bits (104), Expect = 1e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || || || | ||| || |||||||| || | || ||||||||| | || || || Sbjct 5166959 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 5167018 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 || || || |||||||||||||| |||||||||| ||||| || ||||| || || | Sbjct 5167019 ACGCCTAGTCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCGCCATTCACC 5167078 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAA 118698 ||||| ||||| | | | || |||||||| || ||||| || Sbjct 5167079 ACATAGAACTGGCAAAGGGCATGGCATGGAGGTAGGGCCATGAAA 5167123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414470389727716