Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22]
1,269 sequences; 1,803,099,001 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq382 210 2e-49
seq1093 118 9e-22
seq593 95.1 1e-14
>seq382
Length=20934477
Score = 210 bits (232), Expect = 2e-49
Identities = 209/271 (77%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 1260 TGTTTTTTAGAAACGCCACAAGAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCA 1319
|| ||| | ||||| | | ||||| | ||||| |||||||| ||| | || || |||
Sbjct 1091343 TGCTTTCTGGAAACTTCCGAGGAAGTCCTGATTGTGACATGGCAGAAAATGAAGGCTTCA 1091402
Query 1320 AGCCCAGAAAACATGGCCACTTTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATAC 1379
|||||||| ||||||| |||||| || || || || |||||||| | ||||| || ||
Sbjct 1091403 AGCCCAGACAACATGGTCACTTTCAGCAAGGATCATGGGGTTGTGCTCCAGCCGGCCTAT 1091462
Query 1380 AAAGATAAAATGAACATAACTGAGCTTGGACTACAAAACACAACTATAACCTTCTGGAAC 1439
|| ||||| ||||||||||||||||| ||||| | |||||||| || |||||||||||
Sbjct 1091463 AAGGATAAGATGAACATAACTGAGCTGGGACTTAAGAACACAACCATTACCTTCTGGAAT 1091522
Query 1440 ACAACATTGGATGATGAAGGGTGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAG 1499
|| || |||| ||||| || || |||| ||| | || || || || || |||||||||
Sbjct 1091523 ACCACTCTGGACGATGAGGGTTGTTACACGTGCCTCTTCAATACCTTCGGTTCTGGGAAG 1091582
Query 1500 ATGTCAGGAATAGGGTGTCTAACCCTTTTTG 1530
|| |||||| ||| || || ||||| ||||
Sbjct 1091583 ATTTCAGGAGTAGCCTGCCTCACCCTCTTTG 1091613
>seq1093
Length=5597135
Score = 118 bits (130), Expect = 9e-22
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
|| || || ||||||||| | || ||||| ||||||||| | ||||| || |||||||||
Sbjct 5157839 GTGGTGGAGGAGCTCTTCAGGGACGGGGTGAACTGGGGGAGGATTGTGGCCTTCTTTGAG 5157780
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
|| ||||| || ||||||||||| |||||||| | | || | |||| || ||||||
Sbjct 5157779 TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAAC 5157720
Query 3365 ATTGCCGCGTGGATGACAGA 3384
|| ||| ||||||||| ||
Sbjct 5157719 ATCGCCCTGTGGATGACGGA 5157700
>seq593
Length=7795800
Score = 95.1 bits (104), Expect = 1e-14
Identities = 120/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
|| || || | ||| || |||||||| || | || ||||||||| | || || ||
Sbjct 5166959 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 5167018
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
|| || || |||||||||||||| |||||||||| ||||| || ||||| || || |
Sbjct 5167019 ACGCCTAGTCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCGCCATTCACC 5167078
Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAA 118698
||||| ||||| | | | || |||||||| || ||||| ||
Sbjct 5167079 ACATAGAACTGGCAAAGGGCATGGCATGGAGGTAGGGCCATGAAA 5167123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414470389727716
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |