Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq633 111 1e-19 seq490 95.1 1e-14 seq323 89.7 4e-13 seq799 82.4 7e-11 >seq633 Length=1155427 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| |||||| || ||||| || || | || || || | || || Sbjct 85020 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGGCCATCCTC 84961 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193 ||||||||||||||||| || |||||||||||||| |||||| || ||| ||||| Sbjct 84960 TAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG-GTGCCCTCCTTGTCTT 84902 Query 39194 TGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 |||||| | ||| || | | || || || | ||| || || | ||||| | | Sbjct 84901 GGATTTTTGCTCTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCT 84842 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 | || ||||| || || |||||||| ||||||| Sbjct 84841 TGCCAGTCAGGGTCTTCACAAAGATCTGCATCT 84809 >seq490 Length=1953878 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| |||||| || ||||| || || | || || || | || || Sbjct 846154 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGAGAGAGTGCGGCCATCCTC 846213 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||||||||| ||||| || || ||||||||||| | || | || ||| ||| Sbjct 846214 CAGCTGTTTGCCAGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTG 846273 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || ||||| || | || ||||| | ||| || || | ||||| | || Sbjct 846274 GATCTTAGCTTTGACACTCTCAGTGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTT 846333 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 |||||||| || || || ||||| ||||||| Sbjct 846334 GCCCGTCAGGGTCTTCACGAAGATCTGCATCT 846365 >seq323 Length=3567780 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| || || | ||| | |||| || || ||| |||||| || || || || || Sbjct 1427021 CATGCCACCCCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTC 1427080 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 | ||| || || | || || ||||| ||||| ||||| || || | ||||||||| | Sbjct 1427081 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGG 1427140 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 ||| | || ||||| ||| ||| || || | || | | || || || | ||| Sbjct 1427141 GGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTC 1427200 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290 ||| |||| ||||| | || || |||| || || || ||||||||||| || || Sbjct 1427201 CACCTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATTTGCATTTTGAC 1427257 >seq799 Length=572005 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/212 (69%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| | || ||| || ||| || ||||| || || | || || | |||| || Sbjct 368807 CACCAAGTACAGGGTGGACTTTTTCTGAATATTGTAGTCTGGGAGAGTGCAGCCGTCCTC 368866 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||||||||| |||| |||||| || ||||||| | | | | || || ||||| Sbjct 368867 TAGCTGTTTGCCCACAAAAATAAGATGCAGCTGGTCAGGGAGGATGCCGTCCTTGTCTTG 368926 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 |||||| ||||| || | || || || | ||| || || | ||||| | || Sbjct 368927 GATTTTAGCTTTGACATTCTCACTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTT 368986 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || ||||| || || |||||||| || |||| Sbjct 368987 GCCAGTCAGGGTCTTCACAAAGATCTG-ATCT 369017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429538956674597