Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22]
1,269 sequences; 1,803,099,001 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq366 104 2e-17
seq1048 87.8 2e-12
seq353 86.0 5e-12
>seq366
Length=2959005
Score = 104 bits (114), Expect = 2e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| |||||||| |||||||| | || ||||| | || | ||| ||
Sbjct 58968 TCATCTCTGCTAATGAGTTCGTTGGAAAACGTGAGGCCAGGCATCAGTCCCCGCTTCTTG 59027
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| || || | ||||| || ||||||||||| |||||||| || || ||||| |||
Sbjct 59028 AGCCAGAAAATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACCGCAGCAAAAGCT 59087
Query 4692 AC 4693
||
Sbjct 59088 AC 59089
>seq1048
Length=13607314
Score = 87.8 bits (96), Expect = 2e-12
Identities = 152/216 (70%), Gaps = 9/216 (4%)
Strand=Plus/Plus
Query 31765 AGCGCTAGTTAAAACCGATATTCAAAT--TTCTTTACCTTCAGGGTGCTACGGACGAATA 31822
||| || || ||||| | || |||| |||||| ||||||| || || ||| ||||
Sbjct 13144728 AGCCCTTGTGAAAACTAACATGAAAATAGTTCTTT--CTTCAGGCTGTTATGGAAGAATG 13144785
Query 31823 GCTCCTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGAT 31882
|||| || ||||| ||||| | |||| ||| || || | || || ||||| |||| |
Sbjct 13144786 CCTCC-AGTTCTGGCTTGGCTGCAAAACGCTTCATAGATGCAGGAGCTGGTGTCATAGGT 13144844
Query 31883 TCAGACTATAGAGGAAACGTTGGAATTGTGTTGTTT-AATTTTGGAGAAAAATCATACAG 31941
||| |||||||||||| || | ||||| ||||| | ||| | | | ||| || ||
Sbjct 13144845 GAAGATTATAGAGGAAACCTTAGCGTTGTGCTGTTTCACTTTAGCAAAGAAAGTTTAAAG 13144904
Query 31942 TATAAAAAAGGGCGATAGGGTAGCTCAACTAATTTG 31977
| | |||||| ||| || || || || |||||
Sbjct 13144905 T---AGAAAGGGTGATCGGACCGCACAGCTCATTTG 13144937
>seq353
Length=3050693
Score = 86.0 bits (94), Expect = 5e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319
|| || || || ||||| || || |||||||| ||||| |||||||| ||||| ||||||
Sbjct 2768370 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 2768429
Query 4320 ATAAAATCAAACGGATT 4336
||||||||||| |||||
Sbjct 2768430 ATAAAATCAAAGGGATT 2768446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427042995277577
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |