Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq366 104 2e-17 seq1048 87.8 2e-12 seq353 86.0 5e-12 >seq366 Length=2959005 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || ||||||||||| |||||||| |||||||| | || ||||| | || | ||| || Sbjct 58968 TCATCTCTGCTAATGAGTTCGTTGGAAAACGTGAGGCCAGGCATCAGTCCCCGCTTCTTG 59027 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| || || | ||||| || ||||||||||| |||||||| || || ||||| ||| Sbjct 59028 AGCCAGAAAATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACCGCAGCAAAAGCT 59087 Query 4692 AC 4693 || Sbjct 59088 AC 59089 >seq1048 Length=13607314 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/216 (70%), Gaps = 9/216 (4%) Strand=Plus/Plus Query 31765 AGCGCTAGTTAAAACCGATATTCAAAT--TTCTTTACCTTCAGGGTGCTACGGACGAATA 31822 ||| || || ||||| | || |||| |||||| ||||||| || || ||| |||| Sbjct 13144728 AGCCCTTGTGAAAACTAACATGAAAATAGTTCTTT--CTTCAGGCTGTTATGGAAGAATG 13144785 Query 31823 GCTCCTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGAT 31882 |||| || ||||| ||||| | |||| ||| || || | || || ||||| |||| | Sbjct 13144786 CCTCC-AGTTCTGGCTTGGCTGCAAAACGCTTCATAGATGCAGGAGCTGGTGTCATAGGT 13144844 Query 31883 TCAGACTATAGAGGAAACGTTGGAATTGTGTTGTTT-AATTTTGGAGAAAAATCATACAG 31941 ||| |||||||||||| || | ||||| ||||| | ||| | | | ||| || || Sbjct 13144845 GAAGATTATAGAGGAAACCTTAGCGTTGTGCTGTTTCACTTTAGCAAAGAAAGTTTAAAG 13144904 Query 31942 TATAAAAAAGGGCGATAGGGTAGCTCAACTAATTTG 31977 | | |||||| ||| || || || || ||||| Sbjct 13144905 T---AGAAAGGGTGATCGGACCGCACAGCTCATTTG 13144937 >seq353 Length=3050693 Score = 86.0 bits (94), Expect = 5e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 || || || || ||||| || || |||||||| ||||| |||||||| ||||| |||||| Sbjct 2768370 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 2768429 Query 4320 ATAAAATCAAACGGATT 4336 ||||||||||| ||||| Sbjct 2768430 ATAAAATCAAAGGGATT 2768446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427042995277577