Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq593 141 7e-29 >seq593 Length=7795800 Score = 141 bits (156), Expect = 7e-29 Identities = 129/163 (79%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || ||||||| ||| || |||||||| ||||| || ||||||||||||||||| ||||| Sbjct 5166959 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 5167018 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || |||||||| | ||||||||||| ||||| || || ||||| |||| Sbjct 5167019 ACGCCTAGTCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCGCCATTCACC 5167078 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGA 27370 || || ||||| || | ||| ||||| ||||| || ||||||| Sbjct 5167079 ACATAGAACTGGCAAAGGGCATGGCATGGAGGTAGGGCCATGA 5167121 Score = 82.4 bits (90), Expect = 6e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| ||||| || ||||||||||| || || || || || || || | ||| Sbjct 5170248 CATATCTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAGTC 5170307 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 ||| |||| |||| ||| ||| |||| || || | ||| || |||||||| Sbjct 5170308 TCCTTCTTTTCTGTTAGAGAATCCCAGGCCATCCAGGAATTCACGGGACCCATTGGCGTC 5170367 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||| || || ||||| || || ||||| | |||||||| || Sbjct 5170368 CCAGATTTTCACTCCCTTGGACGACAGTTCTTTAGCATTTGTGGATCC 5170415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369501485224739