Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq366 125 1e-23 seq981 123 4e-23 seq353 93.3 6e-14 >seq366 Length=2959005 Score = 125 bits (138), Expect = 1e-23 Identities = 108/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| ||||| | |||||| ||||| ||||| |||||||| ||||| ||||| ||| Sbjct 58968 TCATCTCTGCTAATGAGTTCGTTGGAAAACGTGAGGCCAGGCATCAGTCCCCGCTTCTTG 59027 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| || || | || ||||| ||||||||||| |||||||| || || || || || Sbjct 59028 AGCCAGAAAATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACCGCAGCAAAAGCT 59087 Query 46774 ACAAGTCTCTCTCC 46787 |||| | |||||| Sbjct 59088 ACAACACGCTCTCC 59101 >seq981 Length=171841 Score = 123 bits (136), Expect = 4e-23 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| |||||||| || || ||||| || ||||| | || Sbjct 76937 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTGTAAGGTTCAATGGAC 76996 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| ||||||| ||| |||||||| |||||||| ||||| || || | | |||||| Sbjct 76997 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAAGAAGTAAACTG 77056 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 77057 TTTCTTATACCAT 77069 Score = 114 bits (126), Expect = 2e-20 Identities = 125/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || |||| ||| |||||||| ||||| | || || || || || | || || ||||| Sbjct 107605 CTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCGTGCTGCCAGAATG 107664 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | ||||| |||| || ||| |||| || || |||||||||| | Sbjct 107665 GCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCCGCTGTTTCAGCAGCCAAAGTATCTAGT 107724 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | |||||| || || | |||| ||||| || |||||||||| Sbjct 107725 TCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 107770 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | || ||||| ||||| || ||||| | |||||||| || ||| Sbjct 102474 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 102533 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 |||||||||||| | || |||||||| || ||||| || |||| || | ||||||| Sbjct 102534 TATGTTTCAATAGCAGCATCTATATCTTCTTTGTGAATCCCCACAGATACCCTCATCAAC 102593 Query 77114 ATATGCTGAGGTCGTTC 77130 ||||| || |||| ||| Sbjct 102594 ATATGTTGTGGTCTTTC 102610 Score = 87.8 bits (96), Expect = 3e-12 Identities = 118/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 75986 GCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT- 76044 || || || || || || || || || || |||||||| ||||| || || | |||||| Sbjct 88082 GCCAGATCACAGCTGGCTTCCAAAGCTCCATAATAAATGGTTTCAAAGATTTGCTTATTC 88141 Query 76045 AAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAG 76104 || | || | || || |||| ||||||||||| | |||||||| |||||||| || Sbjct 88142 AATAACTGG-GCCTCTGGACTCTCAAAAGGATACCTCATCAGAATAAAAGCATCTGCCAG 88200 Query 76105 TCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 || || || ||||| ||||| || | ||| | ||||| || Sbjct 88201 ACCTTGTACCCCAATTCCAATGGGGCGATGGCGTTTATTTGA 88242 Score = 86.0 bits (94), Expect = 9e-12 Identities = 110/150 (73%), Gaps = 4/150 (3%) Strand=Plus/Plus Query 76299 CTACCTCAT--TAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGAT 76356 ||||||||| | || ||| ||||| || ||| || ||||| || || ||||| ||||| Sbjct 93201 CTACCTCATCTTTGC--TGGTATATTCTACTATTTCTGTGCACAGGTTGCTACATTTGAT 93258 Query 76357 AGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGG 76416 ||||| || || || ||||||||||| ||||| || || || ||||| | |||| Sbjct 93259 CGTTCCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAAAGCATGTACGG 93318 Query 76417 AGTTCCAGTTTCAATCTGTGATTCGATAAT 76446 || || || || |||| || || ||||| Sbjct 93319 GGTACCTGTCTCTGTCTGAGACTCAATAAT 93348 Score = 86.0 bits (94), Expect = 9e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| ||||||||||| ||||||| ||||||||| |||||||||||||| || ||| Sbjct 94118 TCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACACTCATTCGGACACATTAAAGAC 94177 Query 76580 CACTC 76584 || || Sbjct 94178 CAGTC 94182 >seq353 Length=3050693 Score = 93.3 bits (102), Expect = 6e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 |||||||||| || || | ||| || ||||| ||||| |||||||| || || | || | Sbjct 2773739 CTTCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCT 2773798 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | | ||| |||||||| || || ||||| || ||||| | ||||||||||| || || | Sbjct 2773799 TTAACCAGAATATAGCAGCAAACGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGG 2773858 Query 46772 CGAC 46775 | || Sbjct 2773859 CCAC 2773862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712923091078080