Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq1215 168 1e-36 >seq1215 Length=5034626 Score = 168 bits (186), Expect = 1e-36 Identities = 173/226 (77%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 9254 TGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACA 9313 |||||||||| || |||| ||| ||| ||||| || || || || || || ||||||| Sbjct 1833513 TGGTCTGGAAGAGCCGCTCATCATCCCACTCTGGGTGCTCCTGCTTAAGCACGTCGCACA 1833454 Query 9314 CCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAA 9373 | ||||||||||| | |||||||| ||||||||||||||||| ||||| |||||||| | Sbjct 1833453 CTCTGTTGTGTTCTCGCAGCCAGATCGTGGCGTACATCATGAGACCAGGCACCAGGCCGA 1833394 Query 9374 AAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGT 9433 | |||| || || ||||| | |||| || || || || | || || |||||||| | Sbjct 1833393 ACACCTCCTGGCCCACAGCAAACCGCAGGTGCTCAGGGACGTGAGGCGGGTAGATCATCT 1833334 Query 9434 GCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9479 |||||| ||| |||| | ||||||||||| || || ||||| Sbjct 1833333 CCACCTGAGTGTCCCTGACTGTGGGGGGATACACCTCTCCATCAAT 1833288 Score = 152 bits (168), Expect = 7e-32 Identities = 216/304 (71%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 8283 GAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAG 8342 |||| | ||||| || | || || || || ||||| | |||| ||||||||||| | Sbjct 1835069 GAACACTGAACGAGGTGGAGGGGCAGCCTTTCACGTTATTGCAGATGAGAGACTGAATGG 1835010 Query 8343 TTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACC 8402 || | |||| ||| || ||||| ||||| || || ||||||||||||||||| Sbjct 1835009 AGGCAGTGTTGATGATTTTAAAACCCACTTCTCCACCAAAAGTGCTGGGCTTCCAGTAGT 1834950 Query 8403 CCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGA 8462 || || || ||| ||| |||| || ||||| | ||||| ||||| || | || | Sbjct 1834949 GAGGAGAACATATGGGGTTGCCCATCAGTCCTTTCAAAGAGAAAGGAGCTCCGAGTTCTA 1834890 Query 8463 GAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACA 8522 ||| ||||||| |||||||| | ||| || ||||||||||||| | | | ||||| Sbjct 1834889 CCATGGTCTCACCAAAGATGGCATCGGGGCGAGGCTTTTCCACCAGAAGGGCAGGGTACA 1834830 Query 8523 GCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTC 8582 |||||| || || | ||| || || || || | || ||||| || ||||| |||| Sbjct 1834829 GCTCCATGGCGTCAATGTCACCATAGAGTGCTTCTAACTCCGCAGCCATTTCCTTCTCTC 1834770 Query 8583 CTGT 8586 |||| Sbjct 1834769 CTGT 1834766 Score = 116 bits (128), Expect = 5e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708 |||||||||||| ||||||||||||||||| || || |||||| ||| ||| | || Sbjct 1832430 TCTTACCCCATGGCCCAGTCCTTTAGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 1832371 Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768 ||||| || ||||| || ||| |||| ||||||||||| || || ||||||||||| || Sbjct 1832370 GAACTGATGGGTGAAGTGCTGGGCAAAGAAGGCAAACATCAAATTTGTGCCCTGGGGGTC 1832311 Query 9769 GGGA 9772 ||| Sbjct 1832310 AGGA 1832307 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 |||||||| || || | |||||||| || || | || || ||||| |||| || | | Sbjct 1831935 TCACCTTTCACACCCATGGGAGTTGGGCAGTCATCAGCCACAGGAGGAAGAACTCTGGTG 1831876 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 ||||||||||| || || || | |||||||||| || | |||| || ||||| | Sbjct 1831875 TAATAGGAGAGGTTAGAAAAGGATTCCCAGCTTTTATAGCCATAGTGTGCATTGTAAGTC 1831816 Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059 || |||||||||| ||||| ||||| |||| Sbjct 1831815 GGTGGGCTGTCAACCAAATGTGATCTGGCTGA 1831784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716865428541760