Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22]
1,269 sequences; 1,803,099,001 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq1215 168 1e-36
>seq1215
Length=5034626
Score = 168 bits (186), Expect = 1e-36
Identities = 173/226 (77%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 9254 TGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACA 9313
|||||||||| || |||| ||| ||| ||||| || || || || || || |||||||
Sbjct 1833513 TGGTCTGGAAGAGCCGCTCATCATCCCACTCTGGGTGCTCCTGCTTAAGCACGTCGCACA 1833454
Query 9314 CCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAA 9373
| ||||||||||| | |||||||| ||||||||||||||||| ||||| |||||||| |
Sbjct 1833453 CTCTGTTGTGTTCTCGCAGCCAGATCGTGGCGTACATCATGAGACCAGGCACCAGGCCGA 1833394
Query 9374 AAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGT 9433
| |||| || || ||||| | |||| || || || || | || || |||||||| |
Sbjct 1833393 ACACCTCCTGGCCCACAGCAAACCGCAGGTGCTCAGGGACGTGAGGCGGGTAGATCATCT 1833334
Query 9434 GCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9479
|||||| ||| |||| | ||||||||||| || || |||||
Sbjct 1833333 CCACCTGAGTGTCCCTGACTGTGGGGGGATACACCTCTCCATCAAT 1833288
Score = 152 bits (168), Expect = 7e-32
Identities = 216/304 (71%), Gaps = 0/304 (0%)
Strand=Plus/Minus
Query 8283 GAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAG 8342
|||| | ||||| || | || || || || ||||| | |||| ||||||||||| |
Sbjct 1835069 GAACACTGAACGAGGTGGAGGGGCAGCCTTTCACGTTATTGCAGATGAGAGACTGAATGG 1835010
Query 8343 TTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACC 8402
|| | |||| ||| || ||||| ||||| || || |||||||||||||||||
Sbjct 1835009 AGGCAGTGTTGATGATTTTAAAACCCACTTCTCCACCAAAAGTGCTGGGCTTCCAGTAGT 1834950
Query 8403 CCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGA 8462
|| || || ||| ||| |||| || ||||| | ||||| ||||| || | || |
Sbjct 1834949 GAGGAGAACATATGGGGTTGCCCATCAGTCCTTTCAAAGAGAAAGGAGCTCCGAGTTCTA 1834890
Query 8463 GAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACA 8522
||| ||||||| |||||||| | ||| || ||||||||||||| | | | |||||
Sbjct 1834889 CCATGGTCTCACCAAAGATGGCATCGGGGCGAGGCTTTTCCACCAGAAGGGCAGGGTACA 1834830
Query 8523 GCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTC 8582
|||||| || || | ||| || || || || | || ||||| || ||||| ||||
Sbjct 1834829 GCTCCATGGCGTCAATGTCACCATAGAGTGCTTCTAACTCCGCAGCCATTTCCTTCTCTC 1834770
Query 8583 CTGT 8586
||||
Sbjct 1834769 CTGT 1834766
Score = 116 bits (128), Expect = 5e-21
Identities = 100/124 (81%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708
|||||||||||| ||||||||||||||||| || || |||||| ||| ||| | ||
Sbjct 1832430 TCTTACCCCATGGCCCAGTCCTTTAGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 1832371
Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768
||||| || ||||| || ||| |||| ||||||||||| || || ||||||||||| ||
Sbjct 1832370 GAACTGATGGGTGAAGTGCTGGGCAAAGAAGGCAAACATCAAATTTGTGCCCTGGGGGTC 1832311
Query 9769 GGGA 9772
|||
Sbjct 1832310 AGGA 1832307
Score = 95.1 bits (104), Expect = 2e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967
|||||||| || || | |||||||| || || | || || ||||| |||| || | |
Sbjct 1831935 TCACCTTTCACACCCATGGGAGTTGGGCAGTCATCAGCCACAGGAGGAAGAACTCTGGTG 1831876
Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027
||||||||||| || || || | |||||||||| || | |||| || ||||| |
Sbjct 1831875 TAATAGGAGAGGTTAGAAAAGGATTCCCAGCTTTTATAGCCATAGTGTGCATTGTAAGTC 1831816
Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059
|| |||||||||| ||||| ||||| ||||
Sbjct 1831815 GGTGGGCTGTCAACCAAATGTGATCTGGCTGA 1831784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716865428541760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |