Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq63 232 5e-56
seq9 98.7 8e-16
>seq63
Length=10485012
Score = 232 bits (256), Expect = 5e-56
Identities = 403/575 (70%), Gaps = 11/575 (2%)
Strand=Plus/Minus
Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848
||||| | ||||| |||| | ||| ||||||| |||||||| || ||||| | |||
Sbjct 8862852 GGGGATTTAGGCCCAGTTTATGTCTTTCAGTGGAAGCATTTTGGGGCAGAATACATAGAT 8862793
Query 18849 TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATT 18908
| ||| | |||| | |||||| | || || ||||||| || || || |||||
Sbjct 8862792 AAGGATTCAGATTATTCAGGTCAAGGAGTAGACCAACTGCAAAAGGTCATTGACACAATC 8862733
Query 18909 AAAACAAACCCAGAAAGCCGACGAATGATTAT-ATCGTCTTGGAATCCAAAGGATATCCC 18967
||| ||| |||| | | || |||| || | | | || |||||||||| ||||| ||
Sbjct 8862732 AAACCAACCCCAACGA-CAGAAGAATCATCCTGAGTGGCT-GGAATCCAAAAGATATTCC 8862675
Query 18968 CTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATT 19027
| | || || ||||| || || | | || ||||||| ||| | || |||||| |
Sbjct 8862674 TCTGACGGCCCTCCCTCCGTGCCATGCCCTCTGCCAGTTTTGCGTGGTGAATGGTGAACT 8862615
Query 19028 ATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGC 19087
|||||||| | |||||||| || ||||| |||||||| || || || |||||||| ||
Sbjct 8862614 GTCCTGCCAGCTGTACCAGAGGTCAGGGGACATGGGCCTGGGCGTGCCCTTCAACATCGC 8862555
Query 19088 TGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTT 19147
| ||||| || || |||||||| | || || | |||||||| || | || || ||
Sbjct 8862554 CAGCTATGCCCTGCTCACCTACATGATTGCACACATCACAGGACTAAAGCCAGGTGACTT 8862495
Query 19148 AATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCT-TTAAAAGTGC 19206
| ||||| |||| ||||||||||||||| ||||||| || || ||| | ||| |||
Sbjct 8862494 CGTACATACTTTGGGAGATGCACATATTTACCTGAATCACATTGA-GCTGCTGAAAATGC 8862436
Query 19207 AGCT--AGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAAATGTAACAGA 19264
|||| ||| || |||| ||||| || || ||||| ||||||| || |||
Sbjct 8862435 AGCTTCAGCAAGA--ACCAAGGCCTTTCCCGAAGCTCAAAATCCTTCGAAAAGT-TGAGA 8862379
Query 19265 -TATAAACGACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACAcccccccc 19323
|| | ||||| || || || |||||| |||| || || | ||| || | |
Sbjct 8862378 CAATGGATGACTTCAAGGCTGAAGACTTTCAGATTGAGGGGTACAGTCCTCAACTGACTA 8862319
Query 19324 TAAAAATGGAAATGGCTCTTTAATGGATTTTTAAA 19358
| |||||||||||||| ||||| | |||||||
Sbjct 8862318 TTGAAATGGAAATGGCTGTTTAAAGTGCTTTTAAA 8862284
>seq9
Length=27295742
Score = 98.7 bits (108), Expect = 8e-16
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031
|||| || ||||| || || | | || ||||| ||||| | || ||||| | |||
Sbjct 15743333 ATGGCCCTCCCTCCGTGCCATGCCCTCTGCCAGTTCTACGTGGTGAATGGTGAGCTGTCC 15743274
Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091
||||| | |||||||| || |||||||||||||| || || || |||||||| || |
Sbjct 15743273 TGCCAGCTGTACCAGAGGTCAGGGGATATGGGCCTGGGCGTGCCCTTCAACATCGCCAGC 15743214
Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135
||||| || || |||||||| | || || | ||||| || ||
Sbjct 15743213 TATGCCCTGCTCACCTACATGATCGCACACATCACAGGCCTAAA 15743170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399466104923235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |