Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq121 309 2e-79
seq29 244 8e-60
seq63 167 2e-36
seq167 149 5e-31
seq70 138 8e-28
seq9 86.0 5e-12
>seq121
Length=6552913
Score = 309 bits (342), Expect = 2e-79
Identities = 340/449 (76%), Gaps = 5/449 (1%)
Strand=Plus/Minus
Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATAC-TTTT 4013
|||| || || |||||| |||||| | ||||||||||||||| ||||||||| ||||
Sbjct 5102023 AAAACACCTTCACATTAATCATTCTTTTTATATACTTCAAATTTCCACTTAATACCTTTT 5101964
Query 4014 CTCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAG 4073
|| ||||| ||| ||||||||||||||| |||||| | ||| || |||||| | |
Sbjct 5101963 TTCCTCTTGGACACCAGAAAGAACACTTGGGTATTCTGGAAGAAGCTTATATTTCCCCAA 5101904
Query 4074 ATCAAATTCTGGAAAAAAG---GTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAA 4130
|||| |||||||||||| |||| | |||||| || ||||||||||| ||||||||
Sbjct 5101903 ATCAGTTTCTGGAAAAAAAAATGTGTTATTTTCAAATTCCTGCATGATCCTTGTCACAAA 5101844
Query 4131 CAGTTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTAT 4190
||||| |||| | || | |||| |||| ||||| ||||||| ||||| | |||
Sbjct 5101843 TAGTTTGAGATGGTCTGATTTGTTCATGCCTTCCTTATAAGCAGAACTGCCTCCCACTAT 5101784
Query 4191 CCAGACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATC 4250
||| |||||||| ||||| |||| ||||||||| |||| |||||||||| |||||| |
Sbjct 5101783 CCAAACCATGTCCACTTTCTTTGTTAATTCTGGTTGTTAAATAAGTTTTAAGGCATCACC 5101724
Query 4251 TAAACTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAAC 4310
| ||| || |||| ||||||||| | ||| || | ||||| ||||| | ||||||||
Sbjct 5101723 CAGACTTTTGGCTAGAAAATGAGCACCTTGTAGAGGTTCCTTGAGTTCTCTTCTGAGAAC 5101664
Query 4311 AACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAG-AACCAAGTCTTTT 4369
| | || |||| |||||| | | |||||| | |||| ||| | |||||
Sbjct 5101663 TAATTGAACTCTGTTCTTTAAAAGTCAGTTCTTTTAGGGAAGAGAGTGAGTCTGTCTTCC 5101604
Query 4370 TACCCATAATCACTAAATTCTGTTTATCT 4398
|||||||||||| ||||||| |||| ||
Sbjct 5101603 GACCCATAATCACGAAATTCTATTTACCT 5101575
>seq29
Length=15480060
Score = 244 bits (270), Expect = 8e-60
Identities = 267/353 (76%), Gaps = 14/353 (4%)
Strand=Plus/Plus
Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027
||| || |||||||||||||||||||||||||| ||||| | || || | || || |
Sbjct 11134075 ATTCATCGTTCTTCTCATATACTTCAAATTTGTATTTAATTCCTTCTTCCTTCTGGACGT 11134134
Query 4028 TAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA 4087
|||||||||||| ||| | |||||| |||||||| | ||||| ||||||||
Sbjct 11134135 TAGAAAGAACACCTGGG---------AGAAGTTTTTATTTCTCCAAATCAATTTCTGGAA 11134185
Query 4088 AAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATG 4147
|||| || |||| |||||| ||| |||| ||||| |||||||| ||| |||||| || ||
Sbjct 11134186 AAAAAGTATCACTTTCAAATTCT-GCATAATCCTTGTCACAAATAGTCTAAGATGGCCTG 11134244
Query 4148 GATAACTCATAGCTTCTTTATACACAGAACTACCTCC-AATTATCCAGACCATGTCTACT 4206
| | ||| ||||| ||||| |||||||| ||||| || ||||| | |||||| |||
Sbjct 11134245 GCTTGTTCACGGCTTCCTTATAAACAGAACTGCCTCCCAACTATCCTAATCATGTCCACT 11134304
Query 4207 TTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAA 4266
||||||||||||||||| || || || |||||| ||||||| | | | | ||| | |
Sbjct 11134305 TTATTTGCTAATTCTGGTTGCTCAAAAAATTTTAAGACATCATCCAGATTTTCAGCAAGA 11134364
Query 4267 AAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAAT 4319
||||||| | | |||| | ||||| || || ||||| || | ||||||
Sbjct 11134365 AAATGAGTTTCTTATGGATGTTCCTTGAGGTC---TCTGAGCACTAAATTAAT 11134414
Score = 100 bits (110), Expect = 2e-16
Identities = 89/109 (82%), Gaps = 2/109 (2%)
Strand=Plus/Plus
Query 4339 TTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398
|||||||| ||||| |||| ||| ||||| || |||||||||| |||||||||||| ||
Sbjct 11134680 TTCTTCTCGGGAATAGAGACCCATGTCTTCCTAACCATAATCACCAAATTCTGTTTACCT 11134739
Query 4399 GGTACAGAAGATGTA-GTAGTCATTCTTTGGAAATGTTTAAAATCATTC 4446
||| || || ||| || |||||||||| ||||| ||| || ||||||
Sbjct 11134740 TCTACTGAGGA-GTATGTGGTCATTCTTTTGAAATATTTGAACTCATTC 11134787
>seq63
Length=10485012
Score = 167 bits (184), Expect = 2e-36
Identities = 419/625 (67%), Gaps = 9/625 (1%)
Strand=Plus/Plus
Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATAT-AATGT 101591
|||||||||||| | ||||| ||| | | || || | || || ||| | || ||
Sbjct 8862296 TTAAACAGCCATTTCCATTTCAATAGTCAGTTGAGGACTGTACCCCTC-AATCTGAAAGT 8862354
Query 101592 CATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACG 101651
| || || || |||||||| || ||| |||| | | | | || | || || |
Sbjct 8862355 CTTCAGCCTTGAAGTCATCCATTGTCTCAACTTTTCGAAGGATTTTGAGCTTCGGGAAAG 8862414
Query 101652 GTCTAGGAGTTCGCGTCAACTGCATTTTAAG-AGCATCAATGTGATCTACATAGATGTGA 101710
| || || | || | ||||||||| || ||| |||||||||| | || || ||
Sbjct 8862415 GCCTTGGTTCTTGCTGAAGCTGCATTTTCAGCAGC-TCAATGTGATTCAGGTAAATATGT 8862473
Query 101711 GCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATG 101770
|||||||| | |||||| | || || || ||| ||| |||| || |||||||||
Sbjct 8862474 GCATCTCCCAAAGTATGTACGAAGTCACCTGGCTTTAGTCCTGTGATGTGTGCAATCATG 8862533
Query 101771 CAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGAT 101830
| || | || | |||||| || ||||| || ||||| || | ||||| || ||||
Sbjct 8862534 TAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCCCCTGAC 8862593
Query 101831 CTTTGATACAGTTGACAGGAAAGCTTTCCA-TCACAGACATAAAATTGACTTAATACATG 101889
|| || ||||| || ||||| || | ||| |||| || |||| || | | ||||
Sbjct 8862594 CTCTGGTACAGCTGGCAGGACAGTTCACCATTCAC-CACGCAAAACTGGCAGAGGGCATG 8862652
Query 101890 ACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCT 101949
|| || || | || | |||||| ||| |||||| ||| || | || ||
Sbjct 8862653 GCACGGAGGGAGGGCCGTCAGAGGAATATCTTTTGGATTCCAGCCACTCAGGATGATTCT 8862712
Query 101950 TCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTC 102009
||| || || ||| ||| ||| || || ||||| | || || | |||||| |||||||
Sbjct 8862713 TCTGTC-GTTGGGGTTGGTTTGATTGTGTCAATGACCTTTTGCAGTTGGTCTACTCCTTG 8862771
Query 102010 TCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCC 102069
||| |||||| | | || | |||||||| || |||||| |||||||||| |
Sbjct 8862772 ACCTGAATAATCTGAATCCTTATCTATGTATTCTGCCCCAAAATGCTTCCACTGAAAGAC 8862831
Query 102070 ATACACAGGTCCAAGATCTCCTTCATCTCTGTCATA-AAAACCAAGTTTATCTAAAAATG 102128
||| || || || | ||| ||||| | ||||| | || ||||| | ||| || |
Sbjct 8862832 ATAAACTGGGCCTAAATCCCCTTCTTTTCTGTTGGAGAACCCCAAGCTGTCCTAGAAGT- 8862890
Query 102129 ATCTAGATCCATTCGCATCCCAAAT 102153
|| ||| ||||| |||||||| ||
Sbjct 8862891 CTCGAGACCCATTGGCATCCCAGAT 8862915
>seq167
Length=4688107
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26931 AGCTTTTAGTCTACATTGTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGC 26990
|||| ||| | |||| | | |||||||| || ||||| |||||||| || | ||| |||
Sbjct 2138420 AGCTCTTAAGCCACATGGCGCACAATGGGGGTGACGCAGGTGCAGCCCACGGCCACCAGC 2138479
Query 26991 ATCTTCTCTAGCCTAAATGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATC 27050
||||| || | || || | |||||| | ||| | | | |||| || || |||
Sbjct 2138480 ATCTTTTCCAACCGGAAGCTGTGGGGGCAGTGCTGAGACTCCCTTCGCAGAACCAGGATC 2138539
Query 27051 TCTTGTTGGATAGGGACTGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACAT 27110
||||| ||||| ||||| |||||||||||||||| ||| |||| |||||| | |||||
Sbjct 2138540 TCTTGCTGGATGGGGACGGAGTTCATGTGGTAGTTTACCGTCCCGTCAGCACTGACACAG 2138599
Query 27111 CCTAAGTAGCGACACTTTGCTTCCCAAATCACAGAGGGATATCTATC 27157
|| | | ||| ||||| || ||||| ||||||| ||| ||||| ||
Sbjct 2138600 CCCAGATGGCGGCACTTGGCCTCCCAGATCACAGGGGGGTATCTCTC 2138646
>seq70
Length=9335154
Score = 138 bits (152), Expect = 8e-28
Identities = 111/134 (83%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 4157 TAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTA 4216
|| || | ||||| |||||||| ||||| | |||||| |||||||| |||||||||||||
Sbjct 9245885 TACCTACCTTATAAACAGAACTGCCTCCCACTATCCAAACCATGTCCACTTTATTTGCTA 9245826
Query 4217 ATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTC 4276
||||||| || || |||||||||| |||||||| ||||| || || | |||||||||||
Sbjct 9245825 ATTCTGGTTGCTCAATAAGTTTTAAGGCATCATCCAAACTTTTGGCAAGAAAATGAGCTC 9245766
Query 4277 TATGTGGAAGCTCC 4290
|||||| | |||
Sbjct 9245765 CCTGTGGAGGTTCC 9245752
Score = 120 bits (132), Expect = 2e-22
Identities = 92/109 (84%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| || || |||||||||| | ||||||||| | |||||||| || |||||||||||
Sbjct 9239471 CTTGAGGTCTCTGCTGAGAACTAAATTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGG 9239412
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398
||| |||||||| |||||| ||||||||||||| || ||||||||| ||
Sbjct 9239411 AATAGAGAACCATGTCTTTCTACCCATAATCACCAAGTTCTGTTTACCT 9239363
Score = 113 bits (124), Expect = 3e-20
Identities = 98/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4045 TATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCA 4104
|| ||| || |||||| |||||||| | ||||| |||||||||||| ||||||| ||||
Sbjct 9249100 TACTCTGGCAGAAGTTTATATTTCTCCAAATCAATTTCTGGAAAAAATGTGTCACTTTCA 9249041
Query 4105 AAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCT 4164
|| || ||||| ||||| |||||||| ||| |||||| || ||| | |||| |||||
Sbjct 9249040 AATTCCTGCATAATCCTTGTCACAAATAGTCTAAGATGGCCTGGTTTGTTCATGGCTTCC 9248981
Query 4165 TT 4166
||
Sbjct 9248980 TT 9248979
>seq9
Length=27295742
Score = 86.0 bits (94), Expect = 5e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 102038 TATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT 102097
|||||||| || ||||||||||||||||| ||||| || || || | ||| ||||| |||
Sbjct 15745770 TATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTTCT 15745829
Query 102098 CTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGC 102157
|||| | || || || | || || || || ||| ||||| |||||||| || | |
Sbjct 15745830 CTGTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTTTC 15745889
Query 102158 ACGCC 102162
|| ||
Sbjct 15745890 ACTCC 15745894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361216933404533
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |