Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq133 125 8e-24
seq17 123 3e-23
seq141 107 2e-18
>seq133
Length=6340249
Score = 125 bits (138), Expect = 8e-24
Identities = 110/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209
|| ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| |
Sbjct 5017079 ACCTGAAATTCTCCTGACAAAACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCGATG 5017020
Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 5017019 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 5016960
Query 53270 CTATTTCTAAGACCGTA 53286
|| ||||| | ||| ||
Sbjct 5016959 CTGTTTCTTATACCATA 5016943
Score = 95.1 bits (104), Expect = 1e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084
|| |||||||||||| || ||||| ||||||||||| || | || || || |||| |
Sbjct 5007644 CTCCACTCGTTTCATGAAAAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 5007585
Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144
||||| || |||||||| ||||| || | ||| || ||| | | ||| || |||||||
Sbjct 5007584 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAAATGTCTAAATGCCA 5007525
Query 54145 CGGTTCCAAGTATAT 54159
|| |||| ||| ||
Sbjct 5007524 AGGCTCCAGGTAAAT 5007510
Score = 91.5 bits (100), Expect = 2e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 53388 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 53447
|||| || || || || || | || || || | ||||| || || || || || || |
Sbjct 5012397 CATAGGTTTCATACGGGCCATGCTCCTTGGCCAAGTCACAGCTGGCTTCCAAGGCTCCAT 5012338
Query 53448 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 53507
||||||||||||| ||||||| ||| || || || ||||| | || ||||| ||||
Sbjct 5012337 AATAAATGGTTTCAAAGATCTGCTTGTTCAGTAGCTGGGCTTCTGGACTCTCAAACGGAT 5012278
Query 53508 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 53567
| | | |||||||| || ||||| | ||||| || || || || || || | ||| |
Sbjct 5012277 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATGGGGCGATGGC 5012218
Query 53568 TCTTATTAGA 53577
||||| ||
Sbjct 5012217 GTTTATTTGA 5012208
>seq17
Length=19722643
Score = 123 bits (136), Expect = 3e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216
|||| ||||| || || | ||| |||||||||||||| || ||||| ||||| || || |
Sbjct 6749546 CCTCATCTCTGCTGATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCT 6749487
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276
| ||||| ||||| |||||||| || ||||||||||| |||||||| || || || ||||
Sbjct 6749486 TGAGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACGGCAGCGAAGG 6749427
Query 24277 CAATAAGTCTTTCTCC 24292
| | || | ||||||
Sbjct 6749426 CCACAACCCGTTCTCC 6749411
>seq141
Length=6018405
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218
|| ||||| || || | ||| ||||||||||| ||||| ||||| || || | || ||
Sbjct 2339024 TCATCTCTGCTGATGAGTTCATTGGAAAACGTAAGTCCAGGCATGAGACCTCTTTTCTTT 2338965
Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 24278
||||||||||| | ||||| ||||| || |||||||| |||||||| || ||||| ||
Sbjct 2338964 AGCCAAAATATAGCAGCAAAAGATCCTGAGAAGAAAATCCCTTCTACAGCAGCAAAAGCT 2338905
Query 24279 ATAAGTCTTTCTCC 24292
| | |||||| ||
Sbjct 2338904 ACCACTCTTTCCCC 2338891
Score = 93.3 bits (102), Expect = 5e-14
Identities = 86/109 (79%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 24519 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 24578
|||||||||||||| ||||| ||||||||||||||||| ||||||| || ||||||
Sbjct 2329413 AAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCCAATATGTGAGAGATAAAA 2329354
Query 24579 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 24627
|| || || |||| | | || || ||||| | | || |||||| ||||
Sbjct 2329353 TACTTCTCCTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTTTGATA 2329305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593663838309840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |