Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq77 295 8e-75 seq63 192 7e-44 seq54 176 5e-39 seq9 168 8e-37 >seq77 Length=8881903 Score = 295 bits (326), Expect = 8e-75 Identities = 601/878 (68%), Gaps = 21/878 (2%) Strand=Plus/Minus Query 176373 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 176432 || ||||| | |||| || |||||||| | | |||||| | || ||| || ||| Sbjct 3815238 CTGGTGTTCGTGGTTGGTCTGCTGGGCAATGTGGTGGTGGTGGTCATCCTCACAAAATAT 3815179 Query 176433 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 176492 | || | || | | || ||||| || ||| | || ||||| || ||||||||||| Sbjct 3815178 AAGAGGCTCCGGATTATGACCAACATCTTCCTGCTCAATTTGGCCATTTCTGACTTGCTC 3815119 Query 176493 TTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTT 176552 ||||| | || || ||| ||||| |||||| || |||| |||| ||| |||| Sbjct 3815118 TTTCTAATCTCTCTGGTATTCTGGATTCACTATGTT---ATGTGGAATGAGTGGGTTTTT 3815062 Query 176553 GGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTC 176612 ||| | | |||||||| | || || | | ||||||| | || || || || Sbjct 3815061 GGTTCCTTCATGTGTAAATTCATCTCTGGGCTTTATTACATGGGCTTATATAGTGAGATC 3815002 Query 176613 TTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCT 176672 |||| |||||||||||| || ||||| |||| || || ||||| | || || ||| Sbjct 3815001 TTTTTCATCATCCTGCTGACCATAGACCGGTACCTGGCCATTGTCCACGCCGTGTTTGCC 3814942 Query 176673 TTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCA 176732 || | | || || || | || | || | |||| |||||| | |||||| Sbjct 3814941 TTACGAGCCCGGACTGTCACTTTCGGTGTCGTCATGAGTGTTCTAACCTGGGTCCTGGCA 3814882 Query 176733 GGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAA-TGGTAGGGT 176791 ||| | | ||||||||||| |||| |||| |||| | || | | | || Sbjct 3814881 GGGCTAGCAACTGTCCCTGAATTTATCTTCCATGAGTCCCAAAAGGAGGACTCCCAACGT 3814822 Query 176792 -TCAGTGTGATCCTTACTACCCAGAGATGTCTACAA-ATGTTTGGAGGCGCGCCCACGT- 176848 || | || ||| ||||||| | | | | || || |||| || ||| | Sbjct 3814821 GTCTGCTTG--CCTCTCTACCCAAAAAAC-CAAGAAGATAGATGGAAGCTTTTCCATGCC 3814765 Query 176849 -TGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACT 176907 || || ||| ||| || |||| | ||||| ||||||| |||| ||||||||||| Sbjct 3814764 CTGAGAA--TGAATATCTTGGGTCTTGCTCTGCCTGTGCTCATCATGGTTGTCTGCTACT 3814707 Query 176908 ATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGC 176967 | ||| || | || |||| |||| ||||| | ||||| ||||||||||||||| ||| Sbjct 3814706 CCGGAATCATTAAAACACTGCTGAGATGCCCCGGTAAGAAAAAGTACAAGGCCATCCGGC 3814647 Query 176968 TCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCC 177027 |||| |||||||||||||||| || ||| ||||| ||||||||||||||| | || |||| Sbjct 3814646 TCATTTTTGTCATCATGGTGGTCTTTTTCGTTTTCTGGACACCCTACAACCTGGTCCTCC 3814587 Query 177028 TACTGTCTACCTTTCACGCAACCCTTCTT---AACCTGCAGTGTGCATTGAGCAGTAACT 177084 | || ||| | ||||| ||| |||||| || | ||| ||| ||||| | Sbjct 3814586 TCCTCTCTGCTTTTCAAACAA-TCTTCTTTGAGACAAACTGTGAGCA--GAGCAAGCATC 3814530 Query 177085 TGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAG 177144 ||||| |||| ||| | | || | | |||||||| ||||| ||| ||||||| | Sbjct 3814529 TGGACGTGGCCATGCAGGTGACGGAGGTGATCGCCTACACGCACTGCTGCGTCAACCCCG 3814470 Query 177145 TGATCTACGCGTTCGTGGGGGAGAAGTT-TAGAAGACACCTGTACCACTTCTTCCACACC 177203 | ||||| || ||||| ||||||| ||| || || || || | ||||||||||| || Sbjct 3814469 TCATCTATGCCTTCGTCGGGGAGAGGTTCCAGGAG-CATCTCTGCCACTTCTTCCGCAGG 3814411 Query 177204 TACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCT 177241 |||||| || |||||| | || |||||||| ||||| Sbjct 3814410 CACGTGGTCACCTACCTGAGAAAATACATCCCGTTCCT 3814373 Score = 295 bits (326), Expect = 8e-75 Identities = 601/878 (68%), Gaps = 21/878 (2%) Strand=Plus/Minus Query 9487 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 9546 || ||||| | |||| || |||||||| | | |||||| | || ||| || ||| Sbjct 3815238 CTGGTGTTCGTGGTTGGTCTGCTGGGCAATGTGGTGGTGGTGGTCATCCTCACAAAATAT 3815179 Query 9547 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 9606 | || | || | | || ||||| || ||| | || ||||| || ||||||||||| Sbjct 3815178 AAGAGGCTCCGGATTATGACCAACATCTTCCTGCTCAATTTGGCCATTTCTGACTTGCTC 3815119 Query 9607 TTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTT 9666 ||||| | || || ||| ||||| |||||| || |||| |||| ||| |||| Sbjct 3815118 TTTCTAATCTCTCTGGTATTCTGGATTCACTATGTT---ATGTGGAATGAGTGGGTTTTT 3815062 Query 9667 GGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTC 9726 ||| | | |||||||| | || || | | ||||||| | || || || || Sbjct 3815061 GGTTCCTTCATGTGTAAATTCATCTCTGGGCTTTATTACATGGGCTTATATAGTGAGATC 3815002 Query 9727 TTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCT 9786 |||| |||||||||||| || ||||| |||| || || ||||| | || || ||| Sbjct 3815001 TTTTTCATCATCCTGCTGACCATAGACCGGTACCTGGCCATTGTCCACGCCGTGTTTGCC 3814942 Query 9787 TTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCA 9846 || | | || || || | || | || | |||| |||||| | |||||| Sbjct 3814941 TTACGAGCCCGGACTGTCACTTTCGGTGTCGTCATGAGTGTTCTAACCTGGGTCCTGGCA 3814882 Query 9847 GGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAA-TGGTAGGGT 9905 ||| | | ||||||||||| |||| |||| |||| | || | | | || Sbjct 3814881 GGGCTAGCAACTGTCCCTGAATTTATCTTCCATGAGTCCCAAAAGGAGGACTCCCAACGT 3814822 Query 9906 -TCAGTGTGATCCTTACTACCCAGAGATGTCTACAA-ATGTTTGGAGGCGCGCCCACGT- 9962 || | || ||| ||||||| | | | | || || |||| || ||| | Sbjct 3814821 GTCTGCTTG--CCTCTCTACCCAAAAAAC-CAAGAAGATAGATGGAAGCTTTTCCATGCC 3814765 Query 9963 -TGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACT 10021 || || ||| ||| || |||| | ||||| ||||||| |||| ||||||||||| Sbjct 3814764 CTGAGAA--TGAATATCTTGGGTCTTGCTCTGCCTGTGCTCATCATGGTTGTCTGCTACT 3814707 Query 10022 ATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGC 10081 | ||| || | || |||| |||| ||||| | ||||| ||||||||||||||| ||| Sbjct 3814706 CCGGAATCATTAAAACACTGCTGAGATGCCCCGGTAAGAAAAAGTACAAGGCCATCCGGC 3814647 Query 10082 TCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCC 10141 |||| |||||||||||||||| || ||| ||||| ||||||||||||||| | || |||| Sbjct 3814646 TCATTTTTGTCATCATGGTGGTCTTTTTCGTTTTCTGGACACCCTACAACCTGGTCCTCC 3814587 Query 10142 TACTGTCTACCTTTCACGCAACCCTTCTT---AACCTGCAGTGTGCATTGAGCAGTAACT 10198 | || ||| | ||||| ||| |||||| || | ||| ||| ||||| | Sbjct 3814586 TCCTCTCTGCTTTTCAAACAA-TCTTCTTTGAGACAAACTGTGAGCA--GAGCAAGCATC 3814530 Query 10199 TGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAG 10258 ||||| |||| ||| | | || | | |||||||| ||||| ||| ||||||| | Sbjct 3814529 TGGACGTGGCCATGCAGGTGACGGAGGTGATCGCCTACACGCACTGCTGCGTCAACCCCG 3814470 Query 10259 TGATCTACGCGTTCGTGGGGGAGAAGTT-TAGAAGACACCTGTACCACTTCTTCCACACC 10317 | ||||| || ||||| ||||||| ||| || || || || | ||||||||||| || Sbjct 3814469 TCATCTATGCCTTCGTCGGGGAGAGGTTCCAGGAG-CATCTCTGCCACTTCTTCCGCAGG 3814411 Query 10318 TACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCT 10355 |||||| || |||||| | || |||||||| ||||| Sbjct 3814410 CACGTGGTCACCTACCTGAGAAAATACATCCCGTTCCT 3814373 >seq63 Length=10485012 Score = 192 bits (212), Expect = 7e-44 Identities = 245/335 (73%), Gaps = 2/335 (1%) Strand=Plus/Plus Query 145575 GTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAG 145634 ||| ||||| | | |||||| || ||| |||||||||| || ||| || | || Sbjct 8862335 GTACCCCTCAATCTGAAAGTCTTCAGCCTTGAAGTCATCCATTGTCTCAACTTTTCGAAG 8862394 Query 145635 GATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCA-GCTGGAGCTTCAGGGGCTCCA 145693 ||| ||||| | || || |||| || || || | | |||| | ||||| |||| | Sbjct 8862395 GATTTTGAGCTTCGGGAAAGGCCTTGGT-TCTTGCTGAAGCTGCATTTTCAGCAGCTCAA 8862453 Query 145694 CGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGC 145753 ||| || ||||| | || || || |||| || | |||||| || |||| || | Sbjct 8862454 TGTGATTCAGGTAAATATGTGCATCTCCCAAAGTATGTACGAAGTCACCTGGCTTTAGTC 8862513 Query 145754 CCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCC 145813 | |||| ||| || | ||||||||| ||||||| |||||||| |||||||||||||| | Sbjct 8862514 CTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACGC 8862573 Query 145814 CCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGT 145873 |||| ||||||||||| || | |||||||||||||||||| || || || | ||||| Sbjct 8862574 CCAGGCCCATGTCCCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCATTCACCACGC 8862633 Query 145874 AGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCC 145908 | |||||||| ||| ||||| || || |||||| Sbjct 8862634 AAAACTGGCAGAGGGCATGGCACGGAGGGAGGGCC 8862668 >seq54 Length=12252720 Score = 176 bits (194), Expect = 5e-39 Identities = 135/160 (84%), Gaps = 9/160 (6%) Strand=Plus/Minus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| |||||||| || ||||| || |||||||||||||| |||||||| | ||| Sbjct 675336 CAGCGCCGCAGCCTCAGCCGCAGGGTCTTCAGCTTTTCCCCCAGCGAGTTCACGTGCTCC 675277 Query 138142 TT---TTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAAC 138198 || ||| ||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 675276 TTGACTTCTGGGTCG------TGGTTCTCGGCCTGGGGCATCACCTCCTCCAAGTAAAAC 675223 Query 138199 TGGATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 ||||||||||| |||||||| ||||| ||||||||||||| Sbjct 675222 TGGATCATCTCCGACAGGGCTTGGCAACCCAGGTAACCCT 675183 Score = 113 bits (124), Expect = 5e-20 Identities = 130/171 (76%), Gaps = 8/171 (5%) Strand=Plus/Minus Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356 |||||| ||||| ||||||| |||||| || | |||||| ||||||||||||||||||| Sbjct 674031 AAAGAAAGTCTTCACCCTGCCGAAGGCTGCTCGGAGCTCTCGGAGCATGTGGGGCAGGCT 673972 Query 138357 GGTGGGCAATGTAGG-GCAGTCGTCCCCAGACT---CACTGTCATATTTGTTGTCGGCCC 138412 || || || || || ||||| |||| ||||| |||| | | | || || | Sbjct 673971 GGCTGGGAA-GTGGGTGCAGTTGTCCTCAGACAGGGCACTCTGGTGGCGGCTG---GCTC 673916 Query 138413 ACACCCCGGCCAGGAGAACCAGGCAACACAGCAGCGATGCCCTGAACATGG 138463 ||||||||||| || ||||||||||||||||||| || ||| ||||| Sbjct 673915 CTACCCCGGCCAGCAGGACCAGGCAACACAGCAGCGCTGGGCTGGGCATGG 673865 Score = 109 bits (120), Expect = 6e-19 Identities = 81/95 (85%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 |||| | |||||| | |||||||||||| ||||||||||| ||||||||||||||||| Sbjct 677754 TCAGATCTTCATCCTCATGGTCATGTAGGTTTCTATGTAGTTGATGAAGATGTCAAACTC 677695 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| |||||||| ||| | || ||||||| Sbjct 677694 ACTCATGGCTTTGTAGACACCTCTCTCTTGGAGCT 677660 Score = 89.7 bits (98), Expect = 6e-13 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 138015 CTTGCTGAAGGCGCTCTTCACCTGCTCCACGGCCTTGCTCTTATTCTCGCAGGGCAGGAA 138074 ||| ||||||||||| |||||||||||||| ||||||||||||||||| |||||||| || Sbjct 676633 CTTACTGAAGGCGCTTTTCACCTGCTCCACCGCCTTGCTCTTATTCTCACAGGGCAGAAA 676574 Query 138075 TC 138076 || Sbjct 676573 TC 676572 >seq9 Length=27295742 Score = 168 bits (186), Expect = 8e-37 Identities = 134/161 (83%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| |||| ||| |||| ||||||||| ||||||| |||||||| |||||||||||| Sbjct 15743173 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 15743232 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| ||||| ||||| || | |||||||||||||||||| ||||| || | || Sbjct 15743233 ACGCCCAGGCCCATATCCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACC 15743292 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||||||||| ||| ||||| || || |||||||| Sbjct 15743293 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCAT 15743333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590019392903320