Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq63 156 3e-33 seq9 82.4 5e-11 >seq63 Length=10485012 Score = 156 bits (172), Expect = 3e-33 Identities = 351/515 (68%), Gaps = 13/515 (3%) Strand=Plus/Plus Query 97009 GGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAG-AGCATCAATGTGATTCACATA 97067 ||||||||||| || | || ||||||| | | || ||| ||||||||||||| || Sbjct 8862408 GGGAAAGGCCTTGGTTCTTGCTGAAGCTGCATTTTCAGCAGC-TCAATGTGATTCAGGTA 8862466 Query 97068 AATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGC 97127 ||| || |||||||| ||||| || | || || || || || | |||| || || Sbjct 8862467 AATATGTGCATCTCCCAAAGTATGTACGAAGTCACCTGGCTTTAGTCCTGTGATGTGTGC 8862526 Query 97128 GATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATC 97187 ||||| | || | || | |||||| || ||||| || ||||| || || ||||| || Sbjct 8862527 AATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTC 8862586 Query 97188 AGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCA-TCACACACATAAAACTGACTCA 97246 |||| || || || | ||| ||||| || | ||| |||| ||| ||||||| | | Sbjct 8862587 CCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCATTCAC-CACGCAAAACTGGCAGA 8862645 Query 97247 ATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCA 97306 |||| || || || | ||| | |||| |||| |||||| ||| || | Sbjct 8862646 GGGCATGGCACGGAGGGAGGGCCGTCAGAGGAATATCTTTTGGATTCCAGCCACTCAGGA 8862705 Query 97307 ACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAA 97366 |||||||| ||| | ||||| || || || || | ||| | || | | ||| || | Sbjct 8862706 TGATTCTTCTGTCGTTGGGGTTGGTTTG-ATTGTGTCAATGACCTTTTGCAGTTGGTCTA 8862764 Query 97367 CGCCTTCTCCACCATAAT-TG--TGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCC 97423 | |||| || ||||| || | ||| | || |||||||| ||||||||| ||| Sbjct 8862765 CTCCTTGACCTGAATAATCTGAATCCTT---ATCTATGTATTCTGCCCCAAAATGCTTCC 8862821 Query 97424 ATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAA-ACCAAGCTTA 97482 | || || ||||||| || || | || ||||||| ||| | |||| ||||||| Sbjct 8862822 ACTGAAAGACATAAACTGGGCCTAAATCCCCTTCTTTTCTGTTGGAGAACCCCAAGCTGT 8862881 Query 97483 TCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517 ||| | || | ||| ||||| |||||||| || Sbjct 8862882 CCTAGA-AGTCTCGAGACCCATTGGCATCCCAGAT 8862915 >seq9 Length=27295742 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||| |||||||||||||| || || |||||||| || || | || ||||||||| Sbjct 15745770 TATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTTCT 15745829 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 || | |||| || || | || || || | ||| ||||| |||||||| || | | Sbjct 15745830 CTGTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTTTC 15745889 Query 97522 ACACC 97526 || || Sbjct 15745890 ACTCC 15745894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346751105695310