Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq63 91.5 2e-13 seq50 86.0 9e-12 >seq63 Length=10485012 Score = 91.5 bits (100), Expect = 2e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 205689 TTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATG 205748 ||| || | ||||||| || ||||| || |||| |||| || |||| || |||||||| Sbjct 8862757 TTGGTCTACTCCTTGACCTGAATAATCTGAATCCTTATCTATGTATTCTGCCCCAAAATG 8862816 Query 205749 ACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCT 205793 ||| ||||| |||||||||| |||||||| ||||||||||| Sbjct 8862817 CTTCCACTGAAAGACATAAACTGGGCCTAAATCCCCTTCTTTTCT 8862861 >seq50 Length=12588045 Score = 86.0 bits (94), Expect = 9e-12 Identities = 156/227 (69%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || ||||| || || ||| | ||| | || | | | Sbjct 11770400 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCCAGT 11770341 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| |||| || || ||||||||||| || || || | ||| || Sbjct 11770340 GACACCATTGAAAATGTAAAGGCCAAGATCCAAGATAAAGAGGGCAT-CCCCGTGACCAG 11770282 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||||||| ||||| || || || |||| ||| | | || | ||||| || Sbjct 11770281 CAGAGGCTTATCTTTGCCGGCAAGCAGCTAGAAGATGGCTGCACTCTTTCTGATTACAAC 11770222 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || || ||||| |||||| | || ||||| | ||| | | ||||| Sbjct 11770221 ATCCAGAAAGAGTCAACTCTCCACCTGGTTCTCCGTCTGAGGGGTGG 11770175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755382503574400