Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq161 134 1e-26 seq323 125 6e-24 seq2 118 9e-22 seq101 114 1e-20 seq65 114 1e-20 seq39 111 1e-19 seq50 107 2e-18 seq125 102 7e-17 seq237 87.8 2e-12 >seq161 Length=5000004 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || |||||||| || ||||||||||| | |||||| ||| || Sbjct 410098 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCT 410039 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| || | |||||| || || || ||||||||||| ||| Sbjct 410038 AGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGG 409979 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||| || | ||||| |||||| || ||| ||||| | ||| | || ||| Sbjct 409978 ATCTTGGCTTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 409919 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || ||||||||||| Sbjct 409918 CCGGTCAGGGTCTTCACGAAAATCTGCAT 409890 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || |||||||| || ||||||||||| | ||||| ||| || Sbjct 410325 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCT 410266 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || |||| || | |||||| || | || |||||||| || ||| Sbjct 410265 AGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCACG-GGGATGCCCTCTTTATCTTGG 410207 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | ||| | |||||| || ||| ||||| | || | || ||| Sbjct 410206 ATCTTGGCCTTTACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTG 410147 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTG 118735 || ||||| || || || || ||||| Sbjct 410146 CCAGTCAGGGTCTTCACGAAGATCTG 410121 >seq323 Length=1159590 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || |||||||| || ||||||||||| | |||||| ||| || Sbjct 303411 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 303470 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| || | |||||| ||||| || ||||||||||| ||| Sbjct 303471 AGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTATCTTGG 303530 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| || ||| ||||| | ||| | || ||| Sbjct 303531 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 303590 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || ||||||||||| Sbjct 303591 CCGGTCAGGGTCTTCACGAAAATCTGCAT 303619 >seq2 Length=40953715 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | ||||||||| | || | || ||||| |||||||||||||| || Sbjct 19232370 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 19232429 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||| || ||| || || || || ||||| |||| || | ||||||||| ||||| Sbjct 19232430 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGG 19232489 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || |||||||| ||| ||| || || | ||| | || |||| | || || Sbjct 19232490 AATTCCTTCCTTGTCCTGAATCTTTGCCTTCACATTTTCTATTGTATCCGAGGGTTCAAC 19232549 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || | || || || || || |||||||| ||||||||||| Sbjct 19232550 CTCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTTACGAAAATCTGCAT 19232597 >seq101 Length=7325712 Score = 114 bits (126), Expect = 1e-20 Identities = 152/209 (73%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || |||||||| || ||||||||||| | |||||| ||| || Sbjct 127815 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 127874 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| || | |||||| ||||| || |||||||| |||||| Sbjct 127875 AGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCTTGG 127934 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || ||| ||||||| || ||| ||||| | ||| | || ||| Sbjct 127935 ATCTTGGCCTTCAC--ATTC-TCGGTGTCACTGAGCTCCACCTCCAGGGTGATGGTCTTG 127991 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || ||||||||||| Sbjct 127992 CCGGTCAGGGTCTTCACGAAAATCTGCAT 128020 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || || ||||||||||| | |||||| ||| || ||||| || ||| Sbjct 127599 GTGGATTCGTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 127658 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| || || || ||||||||||| ||| || || ||| Sbjct 127659 GCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCTTTC 127718 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||| | |||||| | ||| ||||| | || | || ||||| ||||| || Sbjct 127719 ACATTTTCAATGGTGTCACTAGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTC 127778 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 127779 TTCACGAAGATCTGCATG 127796 >seq65 Length=10028950 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||| || ||||||||||| | |||||| ||| |||||||| || ||| Sbjct 4318152 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCGAGCTGCTTGCCA 4318093 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| || || || ||||| || |||||| || || | || Sbjct 4318092 GCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTTGTCCTTT 4318033 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||| | |||||| || ||| ||||| | || | || ||||||||||| || Sbjct 4318032 ACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCGGTCAGGGTC 4317973 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 4317972 TTCACGAAGATCTGCATG 4317955 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || |||||||| || ||||||||||| | |||||| ||| || Sbjct 4318392 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCT 4318333 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || |||| || | |||||| || || || ||||||||||| ||| Sbjct 4318332 AGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGG 4318273 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | ||| | |||||| | ||| ||||| | ||| | || ||| Sbjct 4318272 ATCTTGGCCTTTACATTTTCAATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGTCTTG 4318213 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || ||||| || || || || ||||||||| Sbjct 4318212 CCAGTCAGGGTCTTCACGAAGATCTGCATG 4318183 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 ||| || ||||| || ||||| |||| || | |||||| || || || |||||||| || Sbjct 4317676 ATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTT 4317617 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 |||| || || || || | |||| |||||| || ||| ||||| | ||| | Sbjct 4317616 GTCTTGGATCTTGGCCTTCACATTATCGATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 4317557 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| |||||| || || || ||||||||||| Sbjct 4317556 GGTCTTGCAGGTCAGGGTCTTCACGAAAATCTGCAT 4317521 >seq39 Length=13401118 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || ||||| || || |||||||| ||| || |||||| |||||| Sbjct 1513492 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCCTCC 1513433 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| ||||| |||| | | |||||| || || || |||||||||||||| Sbjct 1513432 AGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 1513373 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| || ||| ||||| | ||| | || || Sbjct 1513372 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 1513313 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || || || |||||||| Sbjct 1513312 CCCGTCAGGGTCTTCACGAAGATCTGCAT 1513284 >seq50 Length=12588045 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || |||||||| || ||||||||||| | |||| | ||| || Sbjct 11770648 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCC 11770707 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || |||| || | |||||||||| | || |||||||| || ||| Sbjct 11770708 AGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGATCGTGGGGGATGCCCTCTTTATCTTGG 11770767 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| || ||| |||| | ||| | || ||| Sbjct 11770768 ATCTTGGCCTTCACATTCTCGATGGTGTCATTGGGCTCCACCTTCAAGGTGATGGTCTTG 11770827 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || ||||||||||| Sbjct 11770828 CCGGTCAGGGTCTTCACGAAAATCTGCAT 11770856 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || |||||||| || ||||||||||| | ||||| ||| || Sbjct 11770193 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCT 11770252 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || |||| || | |||||| || | || |||||||| || ||| Sbjct 11770253 AGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCACG-GGGATGCCCTCTTTATCTTGG 11770311 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | ||| | |||||| || ||| ||||| | || | || ||| Sbjct 11770312 ATCTTGGCCTTTACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTG 11770371 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || ||||| || || || || ||||||||| Sbjct 11770372 CCAGTCAGGGTCTTCACGAAGATCTGCATG 11770401 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/199 (70%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||| || ||||||||||| | |||| | ||| || ||||| || ||| Sbjct 11770431 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCCAGCTGCTTGCCA 11770490 Query 118602 GCGTAGATGAGACGCTGCTGATC-GGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660 || | || || | |||||| || ||| || |||||||| || ||| || || || Sbjct 11770491 GCAAAAATAAGCCTCTGCTGGTCAGGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTT 11770550 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | || || |||||| || ||| ||||| | ||| | || ||||| ||||| || Sbjct 11770551 CACATTTTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGT 11770610 Query 118721 TTTTACAAAAATCTGCATG 118739 || | || ||||| ||| Sbjct 11770611 CTTCATGAAGATCTGTATG 11770629 >seq125 Length=6462000 Score = 102 bits (112), Expect = 7e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 118545 GACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCG 118604 |||||||| || || |||| ||| || || ||| ||| || |||||||| || | Sbjct 2357462 GACTCTTTCTGGATATTGTGATCTGACAGAGCGCGGCCATCTTCCAGCTGTTTGCCCACA 2357521 Query 118605 TAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACC 118664 | || |||| ||||||||| || || ||||||||||||||| ||||| ||| || Sbjct 2357522 AAAATCAGACACTGCTGATCAGGGGGGATGCCCTCCTTGTCTTCGATTTTGGCTTTGACA 2357581 Query 118665 TGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTT 118724 | || | |||||| || ||| ||||| | ||| | || ||||| ||||| || || Sbjct 2357582 TTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCTGTCAGGGTCTTC 2357641 Query 118725 ACAAAAATCTGCAT 118738 | || |||||||| Sbjct 2357642 ATGAAGATCTGCAT 2357655 >seq237 Length=2526385 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || ||||| || || |||||||| ||| || |||||| |||||| Sbjct 2104073 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCCTCC 2104132 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 |||||||| ||||| |||| | | |||||| || || || |||||||||||||| Sbjct 2104133 AGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 2104188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433789248881836