Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq323 105 8e-18
seq30 104 3e-17
seq400 100 3e-16
seq161 100 3e-16
seq39 100 3e-16
seq24 100 3e-16
seq76 98.7 1e-15
seq101 95.1 1e-14
seq10 91.5 2e-13
seq65 89.7 6e-13
seq2 86.0 7e-12
seq73 82.4 9e-11
>seq323
Length=1159590
Score = 105 bits (116), Expect = 8e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
|||| |||| |||| ||| ||| || || || |||||||||| ||||| || |
Sbjct 303405 CGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA 303464
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| || |||||||| ||||| || || || | ||||||||||| || | || ||||||
Sbjct 303465 TCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTA 303524
Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148
|| ||| || || | || | | ||||| || | ||||| || | ||||||
Sbjct 303525 TCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 303584
Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189
|| ||||| || || ||||| || || || |||||||| ||
Sbjct 303585 GTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTGAC 303625
>seq30
Length=15425804
Score = 104 bits (114), Expect = 3e-17
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
||||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 12938 TTTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 12879
Query 60123 CTATACTACCGAGGA 60137
|||||||| ||||||
Sbjct 12878 CTATACTAACGAGGA 12864
>seq400
Length=547227
Score = 100 bits (110), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
||||||| || | ||||||||||||| | ||||||||||||||||||| ||||||||||
Sbjct 463730 TTTCTCCCCGTCGGGGAATCGAACCCCGATCTCCCGCGTGACAGGCGGGGATACTCACCA 463671
Query 60123 CTATACTACCGAGGA 60137
|||||||| ||||||
Sbjct 463670 CTATACTAACGAGGA 463656
>seq161
Length=5000004
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || || |||||||||| ||||| || | || ||||||||||| ||||| ||
Sbjct 410081 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAA 410022
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || | ||||||||| | || | || |||||| || ||| || ||| | |
Sbjct 410021 GATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCTTTCACATT 409962
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | ||||| || | ||||| || | |||||||| ||||| || || ||||| ||
Sbjct 409961 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 409902
Query 43172 AAAGATTTGCATTTTTAC 43189
|| || |||||||| ||
Sbjct 409901 GAAAATCTGCATTTTGAC 409884
>seq39
Length=13401118
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1501262 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1501203
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 1501202 TACTAACGAGGAT 1501190
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1503579 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1503520
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 1503519 TACTAACGAGGA 1503508
>seq24
Length=16157387
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 5447953 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 5448012
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 5448013 ATACTAACGAGGA 5448025
>seq76
Length=8897836
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 6128700 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 6128641
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 6128640 TACTAACGAGGA 6128629
>seq101
Length=7325712
Score = 95.1 bits (104), Expect = 1e-14
Identities = 155/221 (70%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
|||| |||| |||| ||| ||| || || || |||||||||| ||||| || |
Sbjct 127809 CGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA 127868
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| || |||||||| ||||| || || || | ||||||||||| || | || ||| |||
Sbjct 127869 TCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTG 127928
Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148
|| ||| || || | | | | | ||||| || ||||| || | ||||||
Sbjct 127929 TCTTGGATCTTGGCCTTCA-CAT--TCTCGGTGTCACTGAGCTCCACCTCCAGGGTGATG 127985
Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189
|| ||||| || || ||||| || || || |||||||| ||
Sbjct 127986 GTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTGAC 128026
>seq10
Length=27182759
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 68731 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 68672
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 68671 ATACTAACGAGGA 68659
>seq65
Length=10028950
Score = 89.7 bits (98), Expect = 6e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || || |||||||||| ||||| || | || ||||||||||| || || ||
Sbjct 4318375 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCTAGCTGCTTGCCTGCAAA 4318316
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || | ||||||||| | || | || |||||| || ||| || || | |
Sbjct 4318315 GATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCCTTTACATT 4318256
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | ||||| || | ||||| || | |||||||| ||||| || || ||||| ||
Sbjct 4318255 TTCAATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 4318196
Query 43172 AAAGATTTGCAT 43183
||||| |||||
Sbjct 4318195 GAAGATCTGCAT 4318184
>seq2
Length=40953715
Score = 86.0 bits (94), Expect = 7e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|||||| | ||| | ||| |||||||||||| ||||| |||| || ||| || | ||
Sbjct 19232385 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 19232444
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| || ||||| ||||| || || |||| |||||| || | || | | ||||||||
Sbjct 19232445 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTGTC 19232504
Query 43091 CATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149
| ||| | |||| || | | | | || || | ||| || |||| || ||||
Sbjct 19232505 C-TGAATCTTTGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTAATGG 19232563
Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || ||||| || || ||||| || || |||||
Sbjct 19232564 TCTTCCCCGTAAGGGTTTTTACGAAAATCTGCAT 19232597
>seq73
Length=9164766
Score = 82.4 bits (90), Expect = 9e-11
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| | |||| ||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 5106458 CTCCCCCTCAGGTAATCGAACCCTGGTCTCCCGCGTGACAGGTAGGGATACTCACCACTA 5106517
Query 60126 TACTACCGAGGA 60137
||| | ||||||
Sbjct 5106518 TACCA-CGAGGA 5106528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571761969295240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |