Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq141 93.3 4e-14
>seq141
Length=6018405
Score = 93.3 bits (102), Expect = 4e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 16257 CTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTT 16316
|||| || || || || | || || ||||| ||||| || ||||| || |||| ||| |
Sbjct 2339026 CTTCATCTCTGCTGATGAGTTCATTGGAAAACGTAAGTCCAGGCATGAGACCTCTTTTCT 2338967
Query 16317 TAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATG 16376
| | |||||||||||| ||||| || || || ||||| || ||||| || || ||||| |
Sbjct 2338966 TTAGCCAAAATATAGCAGCAAAAGATCCTGAGAAGAAAATCCCTTCTACAGCAGCAAAAG 2338907
Query 16377 CAACCAATC 16385
| |||| ||
Sbjct 2338906 CTACCACTC 2338898
Score = 93.3 bits (102), Expect = 4e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944
|||||||||| ||| | | || || |||||| | | | || ||| |||| |
Sbjct 2352758 TTTAAAAATCTGCATCCAAGGTGAAGACGTTATCTGTGGTTTCTGCCATGACTGCAAAAC 2352699
Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004
|||||| || |||| || ||||||||||||||||| ||||| || ||||| ||||
Sbjct 2352698 GTTGATACTCTGCCACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCCAAAGAAATGTTTT 2352639
Query 16005 CCATAAAATCAAAAGGATTTTTTG 16028
||||||||||||| ||||||| ||
Sbjct 2352638 CCATAAAATCAAAGGGATTTTCTG 2352615
Score = 82.4 bits (90), Expect = 7e-11
Identities = 80/103 (78%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 16047 ATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCAC 16106
|||| | ||||| | |||||| || || ||||| || |||||||||||||| ||| |||
Sbjct 2345719 ATCCAAGTTCCACAAGTAATCTGTCAGCTACAAACTCAATATACTGTTTCATCAAAACAC 2345660
Query 16107 AGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAA 16149
| |||||||| || | ||| || | ||||||||||||||
Sbjct 2345659 AATTCATTCCAATGAGGCCAACTGGTAGGGCTTCTGTTAAAAA 2345617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462467003363800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |