Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq67 1633 0.0 seq171 221 8e-53 seq41 98.7 7e-16 >seq67 Length=9811631 Score = 1633 bits (1810), Expect = 0.0 Identities = 1392/1717 (81%), Gaps = 57/1717 (3%) Strand=Plus/Minus Query 107084 TCCCAGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGTCCATCCACAAG------ 107137 ||||||||||| | ||| ||||| || |||| ||| ||| || || ||||| Sbjct 9718793 TCCCAGCATGAATGGCTTGTTTGTAGGGTCAGATTATAGACCTCTGTCAACAAGCCAGGG 9718734 Query 107138 -------GGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTT 107190 | || |||||||| ||||||||||||||||||| || |||||| || | || Sbjct 9718733 GTAAGAGGTTCCTAGGCAGGTCTTGACTGAGGATATTTGTATAGAGAAGAAATACCTTTT 9718674 Query 107191 TACCATCACTCTGGAGTTGAACTTGATGTTCTGG-------ATT-AG------TTTGTAA 107236 | ||||| |||||||||||| |||| ||||| | ||| || ||||||| Sbjct 9718673 TGCCATCCCTCTGGAGTTGAGCTTGGTGTTCCTGTGAATACATTCAGGGTTCATTTGTAA 9718614 Query 107237 TTAAAGGCATTTTGTTCTGTCCAAGGATC---TCCTCCTCCACCTTGCCTGTGCCCAAAC 107293 | |||||||||||||||||||||||||| ||||||||| |||| ||||||||| | | Sbjct 9718613 TCGAAGGCATTTTGTTCTGTCCAAGGATCCCATCCTCCTCCTCCTTCCCTGTGCCCCAGC 9718554 Query 107294 TCTCCTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACA 107353 || ||| | || ||| || ||||||||| | ||||||||||| ||| ||||| || Sbjct 9718553 TCCACTGGTTTCTCATTCCTTGAAGATGGTTTGGTGGAAGAAGCGGCTCTGCCGCCAGCA 9718494 Query 107354 TCATCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCT 107413 ||| |||||||||||||||||||||||||||||||| || ||| ||||||| |||| || Sbjct 9718493 TCACCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCTGTGGTTGCTCTGAGGTTTTCTCT 9718434 Query 107414 CAGGTTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCA 107473 | | | |||||||| | |||||| |||||||||||||| ||| ||| ||||| ||||| Sbjct 9718433 CCGACTGAAATGTGACTTTGATTCCGTGGATCTGGAGTCCCGGGTCTTTCAGAGCCAGCA 9718374 Query 107474 CTGTAGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTC 107533 |||||||||||| ||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct 9718373 CTGTAGGGACATCCTGTACAAGTCCCTGAAGCTGCCAGCGAAGAGAACCATCAACTGTTC 9718314 Query 107534 TGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGT 107593 ||| |||| |||||||||||| |||| ||| |||| ||||| ||||||||||| || Sbjct 9718313 TGGAATCATCCGAGGGGACCAGCAAGCGGTGACGGAGGCTCTCCTGGACAACCTGGAGGT 9718254 Query 107594 GAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGA 107653 ||||| |||||| |||| |||| | ||| | ||||| ||||| ||||| |||||||| Sbjct 9718253 CAAGAAGAAGCGGGAGCCTTTCACAGACACTGACTACCTGAACATGACCAGGGACTGTGA 9718194 Query 107654 GCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTT 107713 || ||| ||| | | |||||||| | | |||||| ||||| ||||||||| ||||||| Sbjct 9718193 GCACTTTAAGACTGAGCGGAAGTTCCTGCGGTTCCCTCTGAGCAAAGAAGAGTTAGACTT 9718134 Query 107714 CCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCG 107773 ||| || || ||||| |||||||||||||||||||| || ||||| ||| | |||||||| Sbjct 9718133 CCCTATCGCGTACTCTATGGTGGTCCATGAGAAGATAGAGAACTTCGAAAGACTGCTGCG 9718074 Query 107774 AGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGAC 107833 ||| ||||||| ||||||||| ||||||||||||||||||||| ||| |||||||| || Sbjct 9718073 AGCTTTGTATGCTCCTCAGAACGTATACTGTGTCCACGTGGATGAGAAATCCCCAGAAAC 9718014 Query 107834 TTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAA 107893 |||||||||||| |||||||| ||| | || |||||||| ||||||||||| |||||||| Sbjct 9718013 TTTCAAAGAGGCAGTCAAGGCAATTGTGTCATGCTTCCCAAATGTCTTCATAGCCAGTAA 9717954 Query 107894 GTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGA 107953 |||||| | |||||||||||||||||||||||| ||||| || ||||| ||||||||||| Sbjct 9717953 GTTGGTTCGGGTGGTTTATGCCTCCTGGTCCAGGGTGCAGGCCGACCTCAACTGTATGGA 9717894 Query 107954 AGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTT 108013 ||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||| Sbjct 9717893 GGACTTGCTCCAGAGCTCAGTGCCATGGAAATACTTGCTGAATACGTGTGGGACAGACTT 9717834 Query 108014 CCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAG 108073 || |||||||||||||||||||||||||||||||||||| ||||||| || |||||||| Sbjct 9717833 TCCTATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGTTGTTGAACGGGAAGAACAG 9717774 Query 108074 TATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGT 108133 ||||||||| || ||| | |||| ||||| |||||||| || | ||||||||| Sbjct 9717773 TATGGAGTCAGAAAAGCCTACGGAGTACAAAAGGTCTCGCTGGACCTATCACTATGAGGT 9717714 Query 108134 GACAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCAT 108193 |||||||||||||| | ||||||||||||||||| || || || |||||| |||| || Sbjct 9717713 GACAGACACACTGTCCATAACCAGCAAGATGAAGGATCCCCCGCCAGATAATATACCTAT 9717654 Query 108194 GTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAA 108253 |||||| |||||||||||| | ||||| ||||||| ||||||||| |||||| | || || Sbjct 9717653 GTTCACGGGGAATGCCTATATCGTGGCTTCTCGAGACTTTGTCCAGCATGTCCTGGAGAA 9717594 Query 108254 CCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCT 108313 ||| || |||| ||||||| | || ||||| ||||||||||||||||||||||| || || Sbjct 9717593 CCCCAAGTCCCGAAGACTGATCGAGTGGGTGAAAGACACCTATAGCCCCGACGAGCATCT 9717534 Query 108314 CTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTA 108373 ||||||||||||||||| || ||||||||||| || ||| |||| ||||||||||| Sbjct 9717533 GTGGGCCACCCTTCAGCGCGCACCGTGGATGCCGGGTTCTATTCCCTACCACCCCAAGTT 9717474 Query 108374 TCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGA 108433 ||||||||| |||||||| ||||| |||||||| |||||||||||| ||| |||||||| Sbjct 9717473 TCACATCTCCGACATGACAGCCATTGCCAGGCTGGTCAAGTGGCAGGGCCATGAGGGAGA 9717414 Query 108434 TGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCAT 108493 |||||| | |||||| || |||||||| ||||| |||| ||| | | || | |||| | Sbjct 9717413 TGTCAGTAGGGGGGCACCGTATGCACCTTGCTCGGGAACCCACCAGCGGTCTGTCTGTGT 9717354 Query 108494 TTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTT 108553 ||| ||| | ||||||||| |||||||||| || ||||||||||| ||||| |||||||| Sbjct 9717353 TTATGGGACTGGGGACCTGCACTGGATTCTTCAAAACCATCACCTTTTGGCTAACAAGTT 9717294 Query 108554 TGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGC 108613 |||||||| ||||||||| ||||| || |||||||||||||||||| ||||| ||||||| Sbjct 9717293 TGACCCGAAGGTGGATGACAACGTTCTTCAGTGCTTAGAAGAGTACTTACGTTATAAGGC 9717234 Query 108614 CATCTATGGGACTGAACTTTGAGCTGCACTGT-------GGGCCA-----GGGAC----- 108656 |||||| |||||||| || |||| ||| |||| | || | ||||| Sbjct 9717233 CATCTACGGGACTGATCTCTGAGATGCCCTGTCAGAGCAGTGCTACCTGTGGGACAAGAA 9717174 Query 108657 --TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGG 108714 ||| ||||| || |||| || |||| || | |||| ||||||| |||||| ||| Sbjct 9717173 AACATGCAAACATTCCTAGGGGGTGCTGGGAC--AGCGGGGAGGGGGACCAGGGCTCTGG 9717116 Query 108715 ----AATCCATGGCATCCCCCAGGGTCAGAGGGCTGC 108747 ||||| |||||||||| | ||||| ||| ||| Sbjct 9717115 AATCAATCCTTGGCATCCCCAA--GTCAGGGGGTTGC 9717081 >seq171 Length=4644964 Score = 221 bits (244), Expect = 8e-53 Identities = 634/957 (66%), Gaps = 45/957 (5%) Strand=Plus/Plus Query 107628 TACCTCAACATAACCAGAGACTGTGAGCGCTT----CAAGGCCCAAAGGAAGTTCATACA 107683 ||| | ||||| |||||||| ||| | ||||| |||||| | | | ||| ||| Sbjct 1297533 TACATAAACATGACCAGAGATTGTCA-CGCTTTCATCAAGGCGCGCAAATATATCACACA 1297591 Query 107684 GTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGA 107743 | || | |||||||||||| ||| || ||||| || || || || ||||||||| | Sbjct 1297592 G---CCCTTTAGTAAAGAAGAGGCAGAATTTCCCATCGCATATTCTATAGTGGTCCATCA 1297648 Query 107744 GAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTG 107803 || ||||||| |||| |||| ||| | ||| | || || || ||||| | ||||| Sbjct 1297649 CAAAATTGAAATGCTTGACAGGCTCCTGAGGGCCATCTACGCGCCCCAGAATTTCTACTG 1297708 Query 107804 TGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTC 107863 | |||||||| || || || | ||| | ||||| || ||| || Sbjct 1297709 CATTCACGTGGACAGAAAATCAGAGGATTCCTTCTTGGCCGCGGTGCTGGGCATCGCGTC 1297768 Query 107864 CTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTC 107923 ||||||| ||||||||| |||||||| || ||| ||||| || ||||| ||| Sbjct 1297769 CTGCTTCAGTAATGTCTTCGTGGCCAGTCAGCTGGAGAGTGTGGTGTACGCCTCGTGGAG 1297828 Query 107924 CAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGG 107981 | | || || || ||||| ||||| ||| | ||| | || ||| | | || || ||| Sbjct 1297829 CCGGGTTCAGGCCGACCTCAACTGCATGCAGGACCT-CTACAG-GATGAGGGCAGACTGG 1297886 Query 107982 AAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTC 108041 |||||||| | ||| ||||| | || || || || || ||||| || || ||| Sbjct 1297887 AAGTACTTGATAAATCTCTGCGGTATGGATTTTCCTATTAAAACCAACTTGGAAATTGTC 1297946 Query 108042 CTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGG---TACCTTCTGAG 108098 | | |||||| | | |||| | |||| | || | ||| | || || | Sbjct 1297947 CGGAAGCTCAAGTCACTAATGGGTGAAAACAACCTAGAAACCGAGAGGATGCCATCCAA- 1298005 Query 108099 TCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTG----ACAGACACACTGT---ACCC 108151 ||||||| | | |||||| | | ||| ||| || || | ||| || | Sbjct 1298006 --CAAAAAAGAAAGGTGGAAAAAGCATTATACGGTTGTTAACGGAAAG-CTGACGAACAC 1298062 Query 108152 T---ACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGC 108208 ||| ||| ||| || ||||| ||| | | ||| ||||| |||| | ||| Sbjct 1298063 AGGGACCGACAAAATGCAGCCCCCTCT---TGAAACT---CCCCTGTTCTCAGGCAGTGC 1298116 Query 108209 CTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAG 108268 ||||||||||| | | | | || | |||| |||| ||| ||| ||||| Sbjct 1298117 CTATTTTGTGGTCAGTAGGAAGTACGTGGAGTATGTGCTAGAGAACGAAAAAATCCAAAA 1298176 Query 108269 ACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCA 108328 | | || |||| ||||||||||| |||||||| || | |||||||||||| |||| Sbjct 1298177 GTTTATGGAGTGGGCAAAAGACACCTACAGCCCCGATGAGTATCTCTGGGCCACCATTCA 1298236 Query 108329 GCGTGCTCCGTGGATG--CCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCA 108383 | | | ||| | ||| || ||||| | |||| ||||| ||||| |||| || Sbjct 1298237 GAG-GATCCCAG-ATGTCCCAGGCTCCCTGTCCTTAAGCCAG---AAGTACGACATGTCT 1298291 Query 108384 GACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATG 108443 |||||| || || || ||| | ||||||||||||||| |||||| ||||| || | Sbjct 1298292 GACATGCACGCGATTGCGAGGTTTGTCAAGTGGCAGTACTTCGAGGGTGATGTTTCCAAG 1298351 Query 108444 GGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCC 108503 || || || || |||||||| ||| |||| | | || | ||| | | |||||| Sbjct 1298352 GGTGCCCCCTACCCACCCTGCAGTGGCGTCCACGTGCGTTCCGTGTGCGTGTTCGGGGCA 1298411 Query 108504 GGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCG 108560 || ||| || ||||||| |||| || || ||| | || || |||||||| ||| || Sbjct 1298412 GGTGACTTGAACTGGATGCTCCGCAAGCACCACTTGTTTGCCAACAAGTTCGACACG 1298468 >seq41 Length=13128303 Score = 98.7 bits (108), Expect = 7e-16 Identities = 202/296 (68%), Gaps = 12/296 (4%) Strand=Plus/Plus Query 107782 ATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAG 107841 ||||||| | || | |||||||| ||| |||||| |||| | |||| || || |||| Sbjct 9179054 ATGCCCC--AAAATGTCTACTGTGTTCACATGGATGAGAAGGCAACAGATACATTTAAAG 9179111 Query 107842 AGGCGGTCAAGGCCATTATTTC-CTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTC 107900 | | || ||| | |||||| ||||||||| |||| ||| ||||| ||| ||| Sbjct 9179112 ATTCAGTGAAG-CGATTATTGAGCTGCTTCCCAAATGCTTTCCTGGCCTCCAAGATGGAG 9179170 Query 107901 CCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTT- 107959 ||||| || |||| ||||| | || |||||||||||||| | ||||| | Sbjct 9179171 CCGGTTGTCTATGGGGGGATCTCCAGGCTCCAGGCTGACCTGAACTGCCTCAAAGACCTC 9179230 Query 107960 ---GCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCC 108016 || | ||| ||||| ||||||||| | || || || ||| ||||||||| Sbjct 9179231 GCGGCGTCCGAG----GTGCCCTGGAAGTACGCCATCAACACGTGTGGGCAAGACTTCCC 9179286 Query 108017 CATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACA 108072 | | |||||||| ||||| || | | || || | || ||||| || |||| Sbjct 9179287 CCTGAAGACCAACAAGGAGATCGTTCAGTATCTGAAAAGCTTTAAGGGGAAAAACA 9179342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348235764854142