Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq63 228 6e-55 >seq63 Length=10485012 Score = 228 bits (252), Expect = 6e-55 Identities = 394/571 (69%), Gaps = 1/571 (0%) Strand=Plus/Minus Query 20205 CAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGC 20264 |||| | |||| |||||||| || || || |||| ||||| |||| |||||||| || Sbjct 8862865 CAACAGAAAAGAAGGGGATTTAGGCCCAGTTTATGTCTTTCAGTGGAAGCATTTTGGGGC 8862806 Query 20265 TGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGT 20324 ||||| | || | | | || |||||| || ||||||||||| ||| | ||||| || Sbjct 8862805 AGAATACATAGATAAGGATTCAGATTATTCAGGTCAAGGAGTAGACCAACTGCAAAAGGT 8862746 Query 20325 TATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGC 20384 ||| | ||| ||| | ||||| |||||||||||||| || | | | |||||| | Sbjct 8862745 CATTGACACAATCAAACC-AACCCCAACGACAGAAGAATCATCCTGAGTGGCTGGAATCC 8862687 Query 20385 TAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGC 20444 |||||| | ||| | | ||| | ||||| || ||| || ||||| |||| ||| | Sbjct 8862686 AAAAGATATTCCTCTGACGGCCCTCCCTCCGTGCCATGCCCTCTGCCAGTTTTGCGTGGT 8862627 Query 20445 TAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCC 20504 ||| |||| |||| || || |||| || | || | || ||||| ||||| || || Sbjct 8862626 GAATGGTGAACTGTCCTGCCAGCTGTACCAGAGGTCAGGGGACATGGGCCTGGGCGTGCC 8862567 Query 20505 TTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 ||||| || || || ||||| ||||| || || ||||||||||| | |||| |||| Sbjct 8862566 CTTCAACATCGCCAGCTATGCCCTGCTCACCTACATGATTGCACACATCACAGGACTAAA 8862507 Query 20565 AACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACC 20624 | |||||||| || || || | ||||| || ||||||||||| ||||| || || | Sbjct 8862506 GCCAGGTGACTTCGTACATACTTTGGGAGATGCACATATTTACCTGAATCACATTGAGCT 8862447 Query 20625 TTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAAC 20684 | ||| | ||| | | | |||||| | ||||| | || || ||||| Sbjct 8862446 GCTGAAAATGCAGCTTCAGCAAGAACCAAGGCCTTTCCCGAAGCTCAAAATCCTTCGAAA 8862387 Query 20685 TGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCA 20744 ||| | || | || || || ||||| || ||| | | || || || | ||| || Sbjct 8862386 AGTTGAGACAATGGATGACTTCAAGGCTGAAGACTTTCAGATTGAGGGGTACAGTCCTCA 8862327 Query 20745 TAATTCAATTCCAATGGAAATGTCTGTTTAA 20775 | ||| |||||||||| |||||||| Sbjct 8862326 ACTGACTATTGAAATGGAAATGGCTGTTTAA 8862296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399146135276935