Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq39 134 1e-26 seq237 118 8e-22 seq323 104 2e-17 seq65 93.3 3e-14 seq101 89.7 4e-13 >seq39 Length=13401118 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| || ||||||||| |||||||||||| ||| ||| | || ||| Sbjct 1513492 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCCTCC 1513433 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || ||||||| ||| ||||| || || | |||||||||||| Sbjct 1513432 AGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 1513373 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| | ||||||||||| ||| || ||||| Sbjct 1513372 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 1513313 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| |||||||| ||||| ||||| Sbjct 1513312 CCCGTCAGGGTCTTCACGAAGATCTGCAT 1513284 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| ||||| | | |||| ||| || ||| ||||||||| |||||||||||| | Sbjct 1515795 CCACCCCTCAAGCGCAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1515736 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| ||||| || || || ||||||| ||| ||||| || || Sbjct 1515735 AGGGTGCGCCCATCCTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1515676 Query 45230 ACACCCTC 45237 | ||||| Sbjct 1515675 ATGCCCTC 1515668 >seq237 Length=2526385 Score = 118 bits (130), Expect = 8e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| ||||| | | |||| ||| || ||| ||||||||| |||||||||||| | Sbjct 2103799 CCACCCCTCAAGCGCAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2103858 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| ||||| ||||| || ||||||| ||| ||||| || || Sbjct 2103859 AGGGTGCGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 2103918 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||| || || ||| || || || | | | | |||| | ||||||| Sbjct 2103919 ATGCCCTCTTTCTCTTGAATCTTCCCTTTCACATTCTCGATGGTGTCACTGGGCTCCACC 2103978 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAA 45327 |||| ||| || ||||| |||||||| |||||||| || Sbjct 2103979 TCCAGGGTGATGGTCTTACCCGTCAGGGTCTTCACGAA 2104016 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| || ||||||||| |||||||||||| ||| ||| | || ||| Sbjct 2104073 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCCTCC 2104132 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || ||||| || || || ||||||| ||| ||||| || || | |||||||||||| Sbjct 2104133 AGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 2104189 >seq323 Length=1159590 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| |||||| ||| ||| ||||| |||||||| || Sbjct 303392 GCCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGA 303451 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || ||||| || || || || || || | || ||| |||||||| || Sbjct 303452 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGG 303511 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||| || || || ||| || | | | | |||| | |||||| Sbjct 303512 GATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCAC 303571 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||||| ||| || |||||||| ||||| |||||||| || || ||||| ||| Sbjct 303572 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 303623 >seq65 Length=10028950 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| ||||| | | |||| ||| || || ||| ||||| |||||||| || Sbjct 4318411 GCCACCCCTCAAACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGA 4318352 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || || || || || || || || || | || ||| ||||| || || Sbjct 4318351 AAGAGTGCGGCCATCTTCTAGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGGGG 4318292 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||| || || || ||| || | | | |||| | | |||||| Sbjct 4318291 GATGCCCTCCTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTAGGCTCCAC 4318232 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| ||| || |||||||| ||||| |||||||| ||||| |||||| Sbjct 4318231 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 4318183 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| ||||| ||| ||| ||||| |||||||| || Sbjct 4318183 GCCACCCCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGA 4318124 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || || || || || || || || || | || ||| ||||| || || Sbjct 4318123 AAGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGG 4318064 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || || ||||| || || | ||| || | | | |||| | |||||| Sbjct 4318063 GATGCCTTCTTTGTCTTGGATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTCCAC 4318004 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| || || |||||||| ||||| |||||||| ||||| |||||| Sbjct 4318003 CTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 4317955 >seq101 Length=7325712 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||||||||||| | | |||| ||||| ||| || ||||| |||||||| || Sbjct 127568 GCCACCTCTCAGCCAAAGGACCAGATGCAGAGTGGATTCGTTCTGGATGTTGTAATCAGA 127627 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || ||||| || || || || || || | || ||| ||||| || || Sbjct 127628 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGG 127687 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||| || || || || || | | | |||| | | |||||| Sbjct 127688 GATGCCCTCCTTATCTTGGATCTTGGCTTTCACATTTTCAATGGTGTCACTAGGCTCCAC 127747 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| || || |||||||| ||||| |||||||| ||||| |||||| Sbjct 127748 CTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 127796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395037725018443