Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq39 134 1e-26
seq237 118 8e-22
seq323 104 2e-17
seq65 93.3 3e-14
seq101 89.7 4e-13
>seq39
Length=13401118
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| || ||||||||| |||||||||||| ||| ||| | || |||
Sbjct 1513492 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCCTCC 1513433
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| || || || ||||||| ||| ||||| || || | ||||||||||||
Sbjct 1513432 AGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 1513373
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | |||| | ||||||||||| ||| || |||||
Sbjct 1513372 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 1513313
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||||| |||||||| ||||| |||||
Sbjct 1513312 CCCGTCAGGGTCTTCACGAAGATCTGCAT 1513284
Score = 82.4 bits (90), Expect = 6e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| ||||| | | |||| ||| || ||| ||||||||| |||||||||||| |
Sbjct 1515795 CCACCCCTCAAGCGCAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1515736
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || ||||| ||||| || || || ||||||| ||| ||||| || ||
Sbjct 1515735 AGGGTGCGCCCATCCTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1515676
Query 45230 ACACCCTC 45237
| |||||
Sbjct 1515675 ATGCCCTC 1515668
>seq237
Length=2526385
Score = 118 bits (130), Expect = 8e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| ||||| | | |||| ||| || ||| ||||||||| |||||||||||| |
Sbjct 2103799 CCACCCCTCAAGCGCAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2103858
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || ||||| ||||| ||||| || ||||||| ||| ||||| || ||
Sbjct 2103859 AGGGTGCGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 2103918
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||||| || || ||| || || || | | | | |||| | |||||||
Sbjct 2103919 ATGCCCTCTTTCTCTTGAATCTTCCCTTTCACATTCTCGATGGTGTCACTGGGCTCCACC 2103978
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAA 45327
|||| ||| || ||||| |||||||| |||||||| ||
Sbjct 2103979 TCCAGGGTGATGGTCTTACCCGTCAGGGTCTTCACGAA 2104016
Score = 89.7 bits (98), Expect = 4e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| || ||||||||| |||||||||||| ||| ||| | || |||
Sbjct 2104073 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCCTCC 2104132
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| ||||| || || || ||||||| ||| ||||| || || | ||||||||||||
Sbjct 2104133 AGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 2104189
>seq323
Length=1159590
Score = 104 bits (114), Expect = 2e-17
Identities = 162/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||| |||| | | |||| |||||| ||| ||| ||||| |||||||| ||
Sbjct 303392 GCCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGA 303451
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| ||| | || ||||| || || || || || || | || ||| |||||||| ||
Sbjct 303452 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGG 303511
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| |||||||| || || || ||| || | | | | |||| | ||||||
Sbjct 303512 GATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCAC 303571
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
||||| ||| || |||||||| ||||| |||||||| || || ||||| |||
Sbjct 303572 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 303623
>seq65
Length=10028950
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||| ||||| | | |||| ||| || || ||| ||||| |||||||| ||
Sbjct 4318411 GCCACCCCTCAAACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGA 4318352
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| ||| | || || || || || || || || || | || ||| ||||| || ||
Sbjct 4318351 AAGAGTGCGGCCATCTTCTAGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGGGG 4318292
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| |||||||| || || || ||| || | | | |||| | | ||||||
Sbjct 4318291 GATGCCCTCCTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTAGGCTCCAC 4318232
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||| ||| || |||||||| ||||| |||||||| ||||| ||||||
Sbjct 4318231 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 4318183
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||| |||| | | |||| ||||| ||| ||| ||||| |||||||| ||
Sbjct 4318183 GCCACCCCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGA 4318124
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| ||| | || || || || || || || || || | || ||| ||||| || ||
Sbjct 4318123 AAGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGG 4318064
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| || || ||||| || || | ||| || | | | |||| | ||||||
Sbjct 4318063 GATGCCTTCTTTGTCTTGGATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTCCAC 4318004
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||| || || |||||||| ||||| |||||||| ||||| ||||||
Sbjct 4318003 CTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 4317955
>seq101
Length=7325712
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
||||||||||| | | |||| ||||| ||| || ||||| |||||||| ||
Sbjct 127568 GCCACCTCTCAGCCAAAGGACCAGATGCAGAGTGGATTCGTTCTGGATGTTGTAATCAGA 127627
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| ||| | || ||||| || || || || || || | || ||| ||||| || ||
Sbjct 127628 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGG 127687
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| |||||||| || || || || || | | | |||| | | ||||||
Sbjct 127688 GATGCCCTCCTTATCTTGGATCTTGGCTTTCACATTTTCAATGGTGTCACTAGGCTCCAC 127747
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||| || || |||||||| ||||| |||||||| ||||| ||||||
Sbjct 127748 CTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 127796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395037725018443
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |