Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq133 107 2e-18
seq2 107 2e-18
seq323 105 6e-18
seq125 95.1 1e-14
seq17 93.3 4e-14
>seq133
Length=6340249
Score = 107 bits (118), Expect = 2e-18
Identities = 113/149 (76%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| |||||| || |||||||| ||||| || || || ||||| || || || ||
Sbjct 5009197 ACCTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTT 5009138
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|||| || ||||||||| || ||||| || || || ||||| ||||||||||| ||
Sbjct 5009137 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAGTCTTTGTAAAGCATGTACGGGGTA 5009078
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| ||||| ||| ||||| ||||| ||
Sbjct 5009077 CCTGTCTCTGTCTGAGACTCAATGATGGC 5009049
>seq2
Length=40953715
Score = 107 bits (118), Expect = 2e-18
Identities = 159/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||||||||| || || || || || || || || |||| |||||||| ||
Sbjct 19232597 ATGCAGATTTTCGTAAAAACCCTTACGGGGAAGACCATTACTCTCGAGGTTGAACCCTCG 19232538
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | |||| || || || ||| | |||||||||||| | || || || ||
Sbjct 19232537 GATACAATAGAAAATGTGAAGGCAAAGATTCA-GGACAAGGAAGGAATTCCTCCTGATCA 19232479
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
|||| | || || || |||||||| || ||||||| | | | ||| || || || |
Sbjct 19232478 GCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTGACTACA 19232420
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|||||||||| || || ||||||||||| || | |||||
Sbjct 19232419 ACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 19232380
>seq323
Length=1159590
Score = 105 bits (116), Expect = 6e-18
Identities = 164/233 (70%), Gaps = 1/233 (0%)
Strand=Plus/Minus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
||||| ||||| |||||||| ||||| ||||| ||||| || |||||| | || || ||
Sbjct 303624 TCAAA-ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAG 303566
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306
|| |||| |||| | || || | || || ||||| ||| | || |||
Sbjct 303565 CCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCC 303506
Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366
||||||||| | || || || |||||||| ||| ||||||| ||| | |||
Sbjct 303505 GACCAGCAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAT 303446
Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| ||||| || ||||| || ||||| || ||||| || | |||||||| ||
Sbjct 303445 TACAACATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGGGGTGG 303393
>seq125
Length=6462000
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||| | ||||| ||||||||||| || |||||| | || ||||| || |
Sbjct 2357655 ATGCAGATCTTCATGAAGACCCTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCCAGC 2357596
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | |||||| | ||| | |||||||| ||| | || || || |||
Sbjct 2357595 GACACCATTGAGAATGTCAAAGCCAAAATCGAAGACAAGGAGGGCATCCCCCCTGATCAG 2357536
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||| |||| || || | ||||||||| |||||||
Sbjct 2357535 CAGTGTCTGATTTTTGTGGGCAAACAGCTGGAAGA 2357501
>seq17
Length=19722643
Score = 93.3 bits (102), Expect = 4e-14
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| ||||| ||||| ||||| || |||||||| || |||||| | ||||| ||| |
Sbjct 6749426 GCCTTCGCTGCCGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGTCGATATTCTGGCTC 6749485
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081
|||||||||||||||||||| ||||| |||||| ||| ||
Sbjct 6749486 AAGAAACGCGGCCTGATGCCTGGCCTCACGTTTTCCAATGA 6749526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445723032501360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |