Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq35 161 1e-34
seq133 125 9e-24
seq17 120 4e-22
seq141 102 1e-16
>seq35
Length=14402153
Score = 161 bits (178), Expect = 1e-34
Identities = 157/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 9231 TTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAG 9290
|| |||||| | ||||||||| | | |||| ||||| ||| || ||||||| |||||||
Sbjct 12217683 TTTTTATTAATTGCTTCCAAAAACCGCAACACATGCATGAAGAGGTTGATGACATCCAAG 12217624
Query 9291 TAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGC 9350
|||| |||| | ||||| ||||| |||||||| || ||| |||| || | ||||||
Sbjct 12217623 TAGAGGCTGATGGCAGCTAATACATACTCTTCAGGTGACAGCCTATGCATCAATGAGTGT 12217564
Query 9351 GTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCC 9410
||||||||||| |||||||| ||||| | |||||| || | |||| || ||||| |||
Sbjct 12217563 GTGTCATAGATGATGAATCCACAGAAAAGAAGGGCTCCCATGGCAGCCAAGACCAATTCC 12217504
Query 9411 ACTGTTTCACTTTGCACAAATA 9432
| ||||| ||| | | |||||
Sbjct 12217503 ATTGTTTGACTATAGAAAAATA 12217482
Score = 125 bits (138), Expect = 9e-24
Identities = 99/119 (83%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539
|| ||||||| ||| |||||||||||||| ||||| |||||||| ||||| | |||||
Sbjct 12209429 CCCGCTCCAAATTTGCTGAAATCTCTCTTAGATTGCAGAGTATACATAGTCAAACCAAGA 12209370
Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598
|| || ||||||||||| || || ||||||| ||| | || |||||||||||||||||
Sbjct 12209369 AATACAGCAGTAGTCAGTATAAACGCTTGCAGAACAATATATACATCATAGAAAGTAAC 12209311
Score = 96.9 bits (106), Expect = 5e-15
Identities = 87/106 (82%), Gaps = 4/106 (4%)
Strand=Plus/Minus
Query 9849 ATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGATG 9908
||||| |||||||||||||| || ||||| ||||||| |||||||| || |||||||||
Sbjct 12189002 ATTCGGATGTGCACACTGGCCGAGGCCACGCAGCTGCCGTAGTTGAAATCATCCTCGATG 12188943
Query 9909 GAGGAGCACGCGTA--GAGGCTC-GGCATGGCCATGGCGGC-GCAG 9950
|||||||| | ||| | || || || |||||||| |||| ||||
Sbjct 12188942 GAGGAGCAGGGGTAGCGGGGGTCGGGGTTGGCCATGTCGGCAGCAG 12188897
Score = 89.7 bits (98), Expect = 7e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 9744 TGTATAATTTTCCGCATGCAGTCAAAGTATAAAAATACTGCAGTTGTTGCCGTTGTTAAA 9803
|||| || | |||| || | |||||||||||||| | |||| ||| | || |||||
Sbjct 12202937 TGTACAACTGTCCGTATAGACTCAAAGTATAAAAAAAAAGCAGCTGTCACTGTAGTTAAG 12202878
Query 9804 AGAAATTGTAGACAAAGGATACCGTAGACTTTTCTTAGAAATGC 9847
|||| ||| ||| ||||||| | |||||||||||||||||| ||
Sbjct 12202877 AGAACTTGCAGAGAAAGGATGCTGTAGACTTTTCTTAGAAAGGC 12202834
>seq133
Length=6340249
Score = 125 bits (138), Expect = 9e-24
Identities = 110/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240
|| ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| |
Sbjct 5017079 ACCTGAAATTCTCCTGACAAAACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCGATG 5017020
Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 5017019 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 5016960
Query 65301 CTATTTCTAAGACCGTA 65317
|| ||||| | ||| ||
Sbjct 5016959 CTGTTTCTTATACCATA 5016943
Score = 91.5 bits (100), Expect = 2e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115
|| |||||||||||| || ||||| ||||||||||| || | || | || |||| |
Sbjct 5007644 CTCCACTCGTTTCATGAAAAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 5007585
Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175
||||| || |||||||| ||||| || | ||| || ||| | | ||| || |||||||
Sbjct 5007584 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAAATGTCTAAATGCCA 5007525
Query 66176 CGGTTCCAAGTATATGGC 66193
|| |||| ||| || ||
Sbjct 5007524 AGGCTCCAGGTAAATAGC 5007507
Score = 91.5 bits (100), Expect = 2e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478
|||| || || || || || | || || || | ||||| || || || || || || |
Sbjct 5012397 CATAGGTTTCATACGGGCCATGCTCCTTGGCCAAGTCACAGCTGGCTTCCAAGGCTCCAT 5012338
Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538
||||||||||||| ||||||| ||| || || || ||||| | || ||||| ||||
Sbjct 5012337 AATAAATGGTTTCAAAGATCTGCTTGTTCAGTAGCTGGGCTTCTGGACTCTCAAACGGAT 5012278
Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598
| | | |||||||| || ||||| | ||||| || || || || || || | ||| |
Sbjct 5012277 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATGGGGCGATGGC 5012218
Query 65599 TCTTATTAGA 65608
||||| ||
Sbjct 5012217 GTTTATTTGA 5012208
>seq17
Length=19722643
Score = 120 bits (132), Expect = 4e-22
Identities = 99/121 (82%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239
|||| ||||| || || | ||| |||||||||||||| || ||||| ||||| || || |
Sbjct 6749546 CCTCATCTCTGCTGATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCT 6749487
Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299
| ||||| ||||| |||||||| || ||||||||||| |||||||| || || || ||||
Sbjct 6749486 TGAGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACGGCAGCGAAGG 6749427
Query 36300 C 36300
|
Sbjct 6749426 C 6749426
>seq141
Length=6018405
Score = 102 bits (112), Expect = 1e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241
|| ||||| || || | ||| ||||||||||| ||||| ||||| || || | || ||
Sbjct 2339024 TCATCTCTGCTGATGAGTTCATTGGAAAACGTAAGTCCAGGCATGAGACCTCTTTTCTTT 2338965
Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300
||||||||||| | ||||| ||||| || |||||||| |||||||| || ||||| ||
Sbjct 2338964 AGCCAAAATATAGCAGCAAAAGATCCTGAGAAGAAAATCCCTTCTACAGCAGCAAAAGC 2338906
Score = 89.7 bits (98), Expect = 7e-13
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 36542 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 36601
|||||||||||||| ||||| ||||||||||||||||| ||||||| || ||||||
Sbjct 2329413 AAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCCAATATGTGAGAGATAAAA 2329354
Query 36602 TATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 36650
|| || || | || | | || || ||||| | | || |||||| ||||
Sbjct 2329353 TACTTCTCCTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTTTGATA 2329305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658108768013720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |