Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq63 149 5e-31 seq9 140 3e-28 >seq63 Length=10485012 Score = 149 bits (164), Expect = 5e-31 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 |||| ||| || ||||| || || || ||||| || || || ||||| || || | Sbjct 8862450 TCAATGTGATTCAGGTAAATATGTGCATCTCCCAAAGTATGTACGAAGTCACCTGGCTTT 8862509 Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || |||| ||| || |||| || || || ||||| |||||||||||||| || || Sbjct 8862510 AGTCCTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 8862569 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || ||||||||||| | |||||||||||||||||||||||||| || || || Sbjct 8862570 ACGCCCAGGCCCATGTCCCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCATTCACC 8862629 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 ||| ||||||| || | | || || |||||||| ||| || Sbjct 8862630 ACGCAAAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCGTC 8862671 >seq9 Length=27295742 Score = 140 bits (154), Expect = 3e-28 Identities = 128/162 (79%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 ||||| |||| ||| ||||||| || || || ||||| |||||||||||||| || || Sbjct 15743173 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 15743232 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || |||||||| || | ||||||||||||||||||||||||||||| || || Sbjct 15743233 ACGCCCAGGCCCATATCCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACC 15743292 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 ||||| ||||| || | | || || |||||||| |||||| Sbjct 15743293 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCATC 15743334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427735423173840