Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq63 136 6e-27
seq17 87.8 3e-12
>seq63
Length=10485012
Score = 136 bits (150), Expect = 6e-27
Identities = 334/498 (67%), Gaps = 9/498 (2%)
Strand=Plus/Minus
Query 70046 GGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCAC 70105
|| ||| || ||||| |||| || ||| | || ||||| || | || ||||||| |||
Sbjct 8862873 GGGTTCTCCAACAGAAAAGAAGGGGATTTAGGCCCAGTTTATGTCTTTCAGTGGAAGCAT 8862814
Query 70106 TCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTG 70165
| || | | || |||| || |||| ||||| ||||| || || || ||| ||
Sbjct 8862813 TTTGGGGCAGAATACATAGATAAGGATTCAGATTATTCAGGTCAAGGAGTAGACCAACTG 8862754
Query 70166 CAGACAATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCA 70225
|| | |||||||||| |||| ||||| || | || || || ||| | || |
Sbjct 8862753 CAAAAGGTCATTGACACAATCAA-ACCAACCCCAACGACAGAAGAATCATCCTGAGTGGC 8862695
Query 70226 TGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGT--TTGGCTCAGT 70283
|||||||| |||| | | | | ||| || || ||||| || || | || ||||
Sbjct 8862694 TGGAATCCAAAAGATATTCCTCTGACGGCCCTCCCTCCGTGCCA-TGCCCTCTGC-CAGT 8862637
Query 70284 TTTACTCGTACGATGGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCC 70343
||| | | |||| || |||| ||| |||| |||||| | ||||||||||
Sbjct 8862636 TTTGCGTGGTGAATGGTGAACTGTCCTGCCAGCTGTACCAGAGGTCAGGGGACATGGGCC 8862577
Query 70344 TCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTA 70403
| || || ||||| ||||| || |||||| | || | || |||||||||| ||||| |
Sbjct 8862576 TGGGCGTGCCCTTCAACATCGCCAGCTATGCCCTGCTCACCTACATGATTGCACACATCA 8862517
Query 70404 CCGGCCTGAAAGCGCA--CGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAA 70461
| || || ||||| || || |||||||| || | || || || || | || | ||
Sbjct 8862516 CAGGACT-AAAGC-CAGGTGACTTCGTACATACTTTGGGAGATGCACATATTTACCTGAA 8862459
Query 70462 TCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGA 70521
|||||| |||| | || |||| || | | || || || ||||| || ||||| |
Sbjct 8862458 TCACATTGAGCTGCTGAAAATGCAGCTTCAGCAAGAACCAAGGCCTTTCCCGAAGCTCAA 8862399
Query 70522 GTTTGCTCGTAAAGTTGA 70539
| ||| ||||||||
Sbjct 8862398 AATCCTTCGAAAAGTTGA 8862381
>seq17
Length=19722643
Score = 87.8 bits (96), Expect = 3e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489
||||| ||||| ||||| || || ||||||||||| ||| ||||||| | || || |||
Sbjct 6749423 GTGGCCTTCGCTGCCGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGTCGATATTCTGG 6749482
Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACG 125522
|||||||| ||||| || ||||| || || |||
Sbjct 6749483 CTCAAGAAACGCGGCCTGATGCCTGGCCTCACG 6749515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740987104203080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |