Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 6e-17
seq65 89.7 4e-13
>seq2
Length=40953715
Score = 102 bits (112), Expect = 6e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||| | | ||| || || | |||||| ||||| || ||||| |||||||| ||
Sbjct 19232371 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 19232430
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | | | | ||||| | ||| |||||||| | |||| | || || || |||
Sbjct 19232431 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 19232490
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||| ||||| ||| ||||| ||| ||| ||||||| ||||| ||| ||
Sbjct 19232491 ATTCCTTCCTTGTCCTGAATCTTTGC-CTTCACATTTTCTATTGTATCCGAGGGTTCAAC 19232549
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| | |||||||| || || || || |||||||| ||||| |||||
Sbjct 19232550 CTCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTTACGAAAATCTGCAT 19232597
>seq65
Length=10028950
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194
||||||| |||| | | || | ||| |||||||| ||||| || |||||||||||
Sbjct 4318184 TGCCACCCCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAG 4318125
Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
||| | | | ||||| | || |||||||| | || | | || ||||| |
Sbjct 4318124 AAAGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGG 4318065
Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
| || ||||||||||| || ||| ||||||| |||| ||||| || || || |
Sbjct 4318064 GGATGCCTTCTTTGTCTTGGATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTCCA 4318005
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
| || | || ||||| || || ||||| || || || || || |||||
Sbjct 4318004 CCTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 4317956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362144845378803
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |