Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq54 143 2e-29
>seq54
Length=12252720
Score = 143 bits (158), Expect = 2e-29
Identities = 123/152 (81%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933
|| ||||| || ||||| || || || |||||||| |||||||||||||| |||||||||
Sbjct 675185 GGTTACCTGGGTTGCCAAGCCCTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATG 675244
Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993
|| ||||| || || |||| || || |||| |||||||| ||||||||||| ||||||
Sbjct 675245 CCCCAGGCCGAGAACCACGACCCAGAAGTCAAGGAGCACGTGAACTCGCTGGGGGAAAAG 675304
Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025
|| || || ||||| || | ||||| |||||
Sbjct 675305 CTGAAGACCCTGCGGCTGAGGCTGCGGCGCTG 675336
Score = 82.4 bits (90), Expect = 7e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 129092 GCTGCAGGAACGAGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACAT 129151
||| || || |||| || ||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct 677661 GCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACAT 677720
Query 129152 AGAATCATACATGAC 129166
|||| | ||||||||
Sbjct 677721 AGAAACCTACATGAC 677735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447706839482960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |