Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq54 109 5e-19
>seq54
Length=12252720
Score = 109 bits (120), Expect = 5e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230
|| |||||||| ||||| |||||||| ||||| ||| | || ||||| ||||| |||||
Sbjct 675194 GGTTGCCAAGCCCTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATGCCCCAGGCC 675253
Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290
|| || |||| || || | || || ||||| || || ||||| ||||||||||||||
Sbjct 675254 GAGAACCACGACCCAGAAGTCAAGGAGCACGTGAACTCGCTGGGGGAAAAGCTGAAGACC 675313
Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313
|| | || | ||||| |||||
Sbjct 675314 CTGCGGCTGAGGCTGCGGCGCTG 675336
Score = 89.7 bits (98), Expect = 4e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438
|||| || || ||||| || ||||| |||||||||||||||||||| |||||||||||||
Sbjct 677660 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 677719
Query 127439 TCGAGACTTACATG 127452
| || || ||||||
Sbjct 677720 TAGAAACCTACATG 677733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430013607055496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |