Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq63 181 7e-41
seq9 98.7 7e-16
>seq63
Length=10485012
Score = 181 bits (200), Expect = 7e-41
Identities = 351/514 (68%), Gaps = 3/514 (1%)
Strand=Plus/Plus
Query 25388 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTA 25447
|||||||| || || || || ||||| | |||||| | || | ||||| ||||||
Sbjct 8862408 GGGAAAGGC-CTTGGTTCTTGCTGAAGCTGCATTTTCAGCAGCTCAATGTGATTCAGGTA 8862466
Query 25448 GACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGC 25507
| || || ||||||| ||| || || || || || || | ||| || || | || ||
Sbjct 8862467 AATATGTGCATCTCCCAAAGTATGTACGAAGTCACCTGGCTTTAGTCCTGTGATGTGTGC 8862526
Query 25508 CATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTC 25567
|||||||| ||||| || |||||||||||||| ||||| || || | |||||||
Sbjct 8862527 AATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGT- 8862585
Query 25568 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACA 25627
|||| ||||||||||| ||||| || || || || | | |||| ||||||| || |
Sbjct 8862586 CCCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCATTCACCACGCAAAACTGGCAGA 8862645
Query 25628 TGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGA 25687
|| | ||||||||| || || | || | ||||| || |||||| | | || ||
Sbjct 8862646 GGGCATGGCACGGAGGGAGGGCCGTCAGAGGAATATCTTTTGGATTCCAGCCACTCAGGA 8862705
Query 25688 TGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTTTTGCAGCTGATCCA 25747
|||| | ||||| | |||||| |||| || | |||||||| || || |
Sbjct 8862706 TGATTCTTCTGTCGTTGGGGTTG-GTTTGATTGTGTCAATGACCTTTTGCAGTTGGTCTA 8862764
Query 25748 CCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACT 25807
| || || || || |||| | | || |||| ||||| || |||| | ||||||
Sbjct 8862765 CTCCTTGACCTGAATAATCTGAATCCTTATCTATGTATTCTGCCCCAAAATGCTTCCACT 8862824
Query 25808 GGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCA 25867
| || | || || || |||| || || |||| |||| || ||| | |||
Sbjct 8862825 GAAAGACATAAACTGGGCCTAAATCCCCTTCTTTTCTGTTGGAGAACCCCAAGCTGTCCT 8862884
Query 25868 AAAAGTCTCTGGAACCATTGGCGTCCCAGATCTT 25901
| ||||||| || |||||||| |||||||| ||
Sbjct 8862885 AGAAGTCTCGAGACCCATTGGCATCCCAGATTTT 8862918
>seq9
Length=27295742
Score = 98.7 bits (108), Expect = 7e-16
Identities = 122/166 (73%), Gaps = 1/166 (1%)
Strand=Plus/Plus
Query 25490 TAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGG 25549
||| || || | || || |||||||| ||||| || |||||||||||||| |||||
Sbjct 15743172 TAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGG 15743231
Query 25550 TACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGC 25609
|| || | ||||| | |||| ||||||||||| ||||| || || ||||| | |
Sbjct 15743232 CACGCCCAGGCCCATAT-CCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCA 15743290
Query 25610 TCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAG 25655
|||||| ||||| || | || | ||||||||| || || || ||
Sbjct 15743291 CCACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCATCAG 15743336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340105336141659
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |