Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq63 181 7e-41 seq9 98.7 7e-16 >seq63 Length=10485012 Score = 181 bits (200), Expect = 7e-41 Identities = 351/514 (68%), Gaps = 3/514 (1%) Strand=Plus/Plus Query 25388 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTA 25447 |||||||| || || || || ||||| | |||||| | || | ||||| |||||| Sbjct 8862408 GGGAAAGGC-CTTGGTTCTTGCTGAAGCTGCATTTTCAGCAGCTCAATGTGATTCAGGTA 8862466 Query 25448 GACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGC 25507 | || || ||||||| ||| || || || || || || | ||| || || | || || Sbjct 8862467 AATATGTGCATCTCCCAAAGTATGTACGAAGTCACCTGGCTTTAGTCCTGTGATGTGTGC 8862526 Query 25508 CATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTC 25567 |||||||| ||||| || |||||||||||||| ||||| || || | ||||||| Sbjct 8862527 AATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGT- 8862585 Query 25568 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACA 25627 |||| ||||||||||| ||||| || || || || | | |||| ||||||| || | Sbjct 8862586 CCCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCATTCACCACGCAAAACTGGCAGA 8862645 Query 25628 TGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGA 25687 || | ||||||||| || || | || | ||||| || |||||| | | || || Sbjct 8862646 GGGCATGGCACGGAGGGAGGGCCGTCAGAGGAATATCTTTTGGATTCCAGCCACTCAGGA 8862705 Query 25688 TGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTTTTGCAGCTGATCCA 25747 |||| | ||||| | |||||| |||| || | |||||||| || || | Sbjct 8862706 TGATTCTTCTGTCGTTGGGGTTG-GTTTGATTGTGTCAATGACCTTTTGCAGTTGGTCTA 8862764 Query 25748 CCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACT 25807 | || || || || |||| | | || |||| ||||| || |||| | |||||| Sbjct 8862765 CTCCTTGACCTGAATAATCTGAATCCTTATCTATGTATTCTGCCCCAAAATGCTTCCACT 8862824 Query 25808 GGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCA 25867 | || | || || || |||| || || |||| |||| || ||| | ||| Sbjct 8862825 GAAAGACATAAACTGGGCCTAAATCCCCTTCTTTTCTGTTGGAGAACCCCAAGCTGTCCT 8862884 Query 25868 AAAAGTCTCTGGAACCATTGGCGTCCCAGATCTT 25901 | ||||||| || |||||||| |||||||| || Sbjct 8862885 AGAAGTCTCGAGACCCATTGGCATCCCAGATTTT 8862918 >seq9 Length=27295742 Score = 98.7 bits (108), Expect = 7e-16 Identities = 122/166 (73%), Gaps = 1/166 (1%) Strand=Plus/Plus Query 25490 TAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGG 25549 ||| || || | || || |||||||| ||||| || |||||||||||||| ||||| Sbjct 15743172 TAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGG 15743231 Query 25550 TACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGC 25609 || || | ||||| | |||| ||||||||||| ||||| || || ||||| | | Sbjct 15743232 CACGCCCAGGCCCATAT-CCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCA 15743290 Query 25610 TCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 |||||| ||||| || | || | ||||||||| || || || || Sbjct 15743291 CCACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCATCAG 15743336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340105336141659