Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq287 87.8 9e-13
seq400 82.4 4e-11
seq76 82.4 4e-11
seq47 82.4 4e-11
>seq287
Length=1644148
Score = 87.8 bits (96), Expect = 9e-13
Identities = 75/93 (81%), Gaps = 3/93 (3%)
Strand=Plus/Plus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|||||||| || |||||| | |||||||||| ||||||| |||||||||||||
Sbjct 192233 AATAAAAAG---AAATGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCAC 192289
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533
||||||| |||||||||||||| ||||| ||
Sbjct 192290 CACGCTCTAACCAACTGAGCTAACCGGCCGACG 192322
Score = 86.0 bits (94), Expect = 3e-12
Identities = 79/99 (80%), Gaps = 4/99 (4%)
Strand=Plus/Plus
Query 11442 ATAAAAAATCAAAT---TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498
||| |||| ||||| |||||| | |||||||||| ||||||| |||||||||||
Sbjct 473196 ATAGAAAA-CAAATCACTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGC 473254
Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGACGA 11537
|| ||||||| |||||||||||||| |||| | ||||
Sbjct 473255 ACCACGCTCTAACCAACTGAGCTAACCGGCCAACCACGA 473293
Score = 84.2 bits (92), Expect = 1e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 227626 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 227567
Query 11528 CCG 11530
|||
Sbjct 227566 CCG 227564
>seq400
Length=547227
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 411956 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 412015
Query 11528 CC 11529
||
Sbjct 412016 CC 412017
>seq76
Length=8897836
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 6124096 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 6124037
Query 11528 CC 11529
||
Sbjct 6124036 CC 6124035
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 6151821 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 6151880
Query 11528 CC 11529
||
Sbjct 6151881 CC 6151882
>seq47
Length=12852284
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 2141988 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 2142047
Query 11528 CC 11529
||
Sbjct 2142048 CC 2142049
Lambda K H
0.638 0.410 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261466396170508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |