Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq54 134 2e-26
>seq54
Length=12252720
Score = 134 bits (148), Expect = 2e-26
Identities = 113/139 (81%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199
|||| |||||||| || || |||||||| || ||||||||||||||| ||||||| || |
Sbjct 675183 AGGGTTACCTGGGTTGCCAAGCCCTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGA 675242
Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259
|||| ||||| || || || ||||| | | ||| |||||||||||||| ||||| || |
Sbjct 675243 TGCCCCAGGCCGAGAACCACGACCCAGAAGTCAAGGAGCACGTGAACTCGCTGGGGGAAA 675302
Query 10260 ATCTAAAGACCCTAAGGCT 10278
| || |||||||| ||||
Sbjct 675303 AGCTGAAGACCCTGCGGCT 675321
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418
|||| || || | ||| |||||||||||||||||||| |||||||| || || ||||| |
Sbjct 677660 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 677719
Query 10419 TAGAAGCATACATGACCATGA 10439
||||| | |||||||||||||
Sbjct 677720 TAGAAACCTACATGACCATGA 677740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547325946846080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |