Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq54 134 2e-26 >seq54 Length=12252720 Score = 134 bits (148), Expect = 2e-26 Identities = 113/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199 |||| |||||||| || || |||||||| || ||||||||||||||| ||||||| || | Sbjct 675183 AGGGTTACCTGGGTTGCCAAGCCCTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGA 675242 Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259 |||| ||||| || || || ||||| | | ||| |||||||||||||| ||||| || | Sbjct 675243 TGCCCCAGGCCGAGAACCACGACCCAGAAGTCAAGGAGCACGTGAACTCGCTGGGGGAAA 675302 Query 10260 ATCTAAAGACCCTAAGGCT 10278 | || |||||||| |||| Sbjct 675303 AGCTGAAGACCCTGCGGCT 675321 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418 |||| || || | ||| |||||||||||||||||||| |||||||| || || ||||| | Sbjct 677660 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 677719 Query 10419 TAGAAGCATACATGACCATGA 10439 ||||| | ||||||||||||| Sbjct 677720 TAGAAACCTACATGACCATGA 677740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547325946846080