Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq403 178 2e-39
seq218 125 1e-23
>seq403
Length=533493
Score = 178 bits (196), Expect = 2e-39
Identities = 185/243 (76%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 9622 ATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGA 9681
||||| || | ||||| ||||| | || ||| ||| ||||| || || |||||||
Sbjct 188589 ATGAGCCGGCTCGTCTGGAACAGACGCTCATCATCCCACTCTGGGTGCTCCTGTTTCAGC 188648
Query 9682 ACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGC 9741
||||| ||||||||||| ||||||| |||||||| || || |||||||| |||||||||
Sbjct 188649 ACATCACACACTCTGTTATGTTCCCGCAGCCAGATCGTGGCATACATCATCAGACCAGGC 188708
Query 9742 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGA 9801
||||| ||||| | || || || ||||| | |||| | ||| || || | ||| ||
Sbjct 188709 ACCAGCCCAAAGACTTCCTGGCCCACAGCAAACCGCAGGTGTTCAGGAACATGGGGTGGG 188768
Query 9802 TAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATC 9861
|||||||| | |||||| ||||||||| | ||| ||||||| || || ||||| | |
Sbjct 188769 TAGATCATCTCCACCTGAGTATCTTTGACTGTGGGAGGATACACCTCTCCATCAATTACC 188828
Query 9862 TGA 9864
|||
Sbjct 188829 TGA 188831
Score = 131 bits (144), Expect = 2e-25
Identities = 150/202 (74%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 10028 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 10087
|||||||||||| ||||||||||| ||||| | || |||||| ||| ||| | ||
Sbjct 189602 TCTTACCCCATGGCCCAGTCCTTTGGTGAAACCTGGCCCTCGCTTATGATCTGTCTTGAA 189661
Query 10088 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 10147
||| || || ||||| || ||| ||||||| |||||||| | || ||||||||||||||
Sbjct 189662 AAATTGATGGGTGAAGTGCTGGGCAAAAAATGCAAACATCATATTTGTGCCCTGGGGATC 189721
Query 10148 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGAtt 10207
||| |||| | || | |||||| ||||||||||| | | | ||| || || |
Sbjct 189722 AGGAATGAACTTTCTTCTTAGAAGAAATTTTTCCACAATCTCTTTAGAATCAGGAAGCTC 189781
Query 10208 ttttttACCTGGTGAACGAGAA 10229
||| || |||| || |||||
Sbjct 189782 TTTCTTGCCTGAAAAATGAGAA 189803
Score = 91.5 bits (100), Expect = 2e-13
Identities = 180/264 (68%), Gaps = 2/264 (1%)
Strand=Plus/Plus
Query 9322 CTTACTCGGCCAGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGGGTC 9381
||||| | |||||| ||||| | |||| ||||| || | |||||||| || || |
Sbjct 187995 CTTACCCTGCCAGCAATTTGCCTGCTGAAGGATTCCACAAACTGGGTAAGCCCATGTTCC 188054
Query 9382 ATGAGTATGGAATTGTTGTAAACGAAGTTAATGTAGTCATACTTTGTTTTATCAATCTCA 9441
| ||||| || |||||||| || || | | | | |||| | ||| || |
Sbjct 188055 AGCAGTATAGAGTTGTTGTAGACAAACTGTTGGAAATTGTACTCCTGGTCATCTATTTGC 188114
Query 9442 AACGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACGA 9501
|| | || |||| || | ||||||||| || | | |||||||||| | | |||||
Sbjct 188115 AAAGTGTCAGGCAGAAGGGGATGCCAGTGGTAGAGCGTGTTAAACTCAGCAGCAATACGG 188174
Query 9502 TTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAACTGAAAGTG 9560
|||||||||||||| | | ||| ||||| || || | |||| || || |||||
Sbjct 188175 TTTTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAGCTTGAAGTG 188233
Query 9561 GTAGCCGCTGAGCTGCTGAACATA 9584
||||| || | ||||| |||||
Sbjct 188234 ATAGCCACTCAAGTGCTGTACATA 188257
>seq218
Length=3091361
Score = 125 bits (138), Expect = 1e-23
Identities = 149/202 (74%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 8739 TCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGG 8798
||||||| || || |||| || || || |||||||| || |||||||| | || |
Sbjct 70553 TCTTGACCATATTGAAGCCCATCTCACCACCAAAGGTGCTCGGCTTCCAGTACTCTGGAG 70612
Query 8799 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGC 8858
|||||||| ||| | | |||||| ||||||||||| |||||||| | || | || |
Sbjct 70613 AGCAGATGGGATTCCCTAGGAGGCCCTTGAGGGAAAAGGGAGCCCCAATTTCTATCATAC 70672
Query 8859 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCA 8918
|||| || ||||||| ||||||| || ||| |||| | | || | ||| |||||||
Sbjct 70673 TCTCCCCAAAGATGGAGTTGGGATGGCACTTCTCCAGAAGCAGCCCTGGGTAGAACTCCA 70732
Query 8919 CAGCCTCGATGTCTCCGTAAAG 8940
|| ||||||||||| || ||
Sbjct 70733 AGGCATCGATGTCTCCATACAG 70754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708455869393520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |