Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq39 116 3e-21
seq237 98.7 9e-16
seq65 89.7 5e-13
seq18 89.7 5e-13
seq50 86.0 6e-12
seq101 84.2 2e-11
>seq39
Length=13401118
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| | || | |||| ||||| ||| || ||||| || | ||| || ||| |
Sbjct 1513510 CCCCCTCTGAGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1513451
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| ||||||||||||||| || ||||||| || || ||||| || || ||
Sbjct 1513450 AGGGTGCGCCCATCCTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1513391
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| || || ||||| | || || ||||||||| ||| |||||| | | || ||
Sbjct 1513390 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 1513331
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | |||||||| || || || || || ||||| |||||||||||
Sbjct 1513330 TCCAGGGTGATGGTCTTACCCGTCAGGGTCTTCACGAAGATCTGCAT 1513284
>seq237
Length=2526385
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 94770 AATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGT 94829
|| || | || || || ||||| |||| |||| ||| | ||| || ||||| || | ||
Sbjct 2103788 AACTTAAGACACCACCCCTCAAGCGCAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGT 2103847
Query 94830 TATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCT 94889
| || ||| || ||| ||||||||||||||| ||| ||||||| || || ||||
Sbjct 2103848 TGTAGTCGGACAGGGTGCGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCT 2103907
Query 94890 GATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAG 94949
| || || || || || ||||| || | ||| || | || || ||| ||||||
Sbjct 2103908 GGTCAGGGGGGATGCCCTCTTTCTCTTGAATCTTCCCTTTCACATTCTCGATGGTGTCAC 2103967
Query 94950 CGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
| | || || || | |||||||| || || || || || ||||| ||
Sbjct 2103968 TGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAGGGTCTTCACGAA 2104016
>seq65
Length=10028950
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || |||| |||| |||| |||| || || || || || | ||| |||||
Sbjct 4318182 CCACCCCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 4318123
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| |||| | ||| || ||||| || || ||||||| | || ||||| || || ||
Sbjct 4318122 AGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 4318063
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||||||||| | || || |||| || | | |||||| | | || ||
Sbjct 4318062 ATGCCTTCTTTGTCTTGGATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTCCACC 4318003
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| | |||||||| || || || || || ||||| |||||||||||||
Sbjct 4318002 TCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATGC 4317954
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || ||||| || | |||| ||| | ||| || || || || | ||| |||||
Sbjct 4318410 CCACCCCTCAAACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 4318351
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| |||| | ||| || ||||| || || ||||||| | || ||||| || || ||
Sbjct 4318350 AGAGTGCGGCCATCTTCTAGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 4318291
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| || || || || | || || ||||| || | | |||||| | || ||
Sbjct 4318290 ATGCCCTCCTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTAGGCTCCACC 4318231
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| | |||||||| || ||||| || || ||||| |||||||||||||
Sbjct 4318230 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATGC 4318182
>seq18
Length=19408490
Score = 89.7 bits (98), Expect = 5e-13
Identities = 116/157 (74%), Gaps = 4/157 (3%)
Strand=Plus/Plus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||||||||||||||| || ||||||| | ||| | ||||| |||||||| ||||| ||
Sbjct 14614797 ATCCTCCAGCTGTTTGCCAGCAAAGATCAGTCTCT--TGATCAGGAGGAATTCCTTCCTT 14614854
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | ||| | ||||| || || | || || | | | || || |||| | |||
Sbjct 14614855 ATCCTGAATGTCGGCCTTTACATTTCCTATTGTATCCGAGAGTTCAACCTCAAGAGGGAT 14614914
Query 94972 GGTTTT-TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| || |||| |||| ||||||||||| | ||||||
Sbjct 14614915 GGTCTTCTCCA-TAAGGGTTTTCACAAAAACCTGCAT 14614950
>seq50
Length=12588045
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/229 (69%), Gaps = 1/229 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || |||| || | |||| ||| | ||| || || || || | ||| |||||
Sbjct 11770175 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 11770234
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| |||| | ||| || ||||| || ||| ||||||| | || ||||| || | |||
Sbjct 11770235 AGAGTGCAGCCATCTTCTAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCACGGGGA 11770294
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
| || ||||| || | || || ||||| || | | |||||| | | || ||
Sbjct 11770295 -TGCCCTCTTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTGGGCTCCACC 11770353
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| | |||||||| || ||||| || || ||||| |||||||||||||
Sbjct 11770354 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATGC 11770402
>seq101
Length=7325712
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||||| | | |||| |||| ||| ||||| || || | ||| |||||
Sbjct 127569 CCACCTCTCAGCCAAAGGACCAGATGCAGAGTGGATTCGTTCTGGATGTTGTAATCAGAA 127628
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| |||| | ||| |||||||| || || ||||||| | || ||||| || || ||
Sbjct 127629 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 127688
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| || || || || | || || || || || | | |||||| | || ||
Sbjct 127689 ATGCCCTCCTTATCTTGGATCTTGGCTTTCACATTTTCAATGGTGTCACTAGGCTCCACC 127748
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| | |||||||| || ||||| || || ||||| |||||||||||||
Sbjct 127749 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATGC 127797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448247586869880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |