Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq133 125 9e-24
seq17 123 3e-23
seq141 107 2e-18
>seq133
Length=6340249
Score = 125 bits (138), Expect = 9e-24
Identities = 110/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396
|| ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| |
Sbjct 5017079 ACCTGAAATTCTCCTGACAAAACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCGATG 5017020
Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 5017019 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 5016960
Query 62457 CTATTTCTAAGACCGTA 62473
|| ||||| | ||| ||
Sbjct 5016959 CTGTTTCTTATACCATA 5016943
Score = 96.9 bits (106), Expect = 4e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271
|| |||||||||||| || ||||| ||||||||||| || | || || || |||| |
Sbjct 5007644 CTCCACTCGTTTCATGAAAAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 5007585
Query 63272 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63331
||||| || |||||||| ||||| || | ||| || ||| | | ||| || |||||||
Sbjct 5007584 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAAATGTCTAAATGCCA 5007525
Query 63332 CGGTTCCAAGTATATGGC 63349
|| |||| ||| || ||
Sbjct 5007524 AGGCTCCAGGTAAATAGC 5007507
Score = 86.0 bits (94), Expect = 8e-12
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 62575 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62634
|||| || || || || || | || || || | ||||| || || || || || || |
Sbjct 5012397 CATAGGTTTCATACGGGCCATGCTCCTTGGCCAAGTCACAGCTGGCTTCCAAGGCTCCAT 5012338
Query 62635 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 62694
||||||||||||| ||||||| ||| || || || ||||| | || ||||| ||||
Sbjct 5012337 AATAAATGGTTTCAAAGATCTGCTTGTTCAGTAGCTGGGCTTCTGGACTCTCAAACGGAT 5012278
Query 62695 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62754
| | | |||||||| || || || | ||||| || || || || || || | ||| |
Sbjct 5012277 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATGGGGCGATGGC 5012218
Query 62755 TCTTATTAGA 62764
||||| ||
Sbjct 5012217 GTTTATTTGA 5012208
>seq17
Length=19722643
Score = 123 bits (136), Expect = 3e-23
Identities = 100/121 (83%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385
|||| ||||| || || ||||| |||||||||||||| || ||||| ||||| || || |
Sbjct 6749546 CCTCATCTCTGCTGATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCT 6749487
Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445
| ||||| ||||| || || || || |||||||||||||||||||| || ||||| ||||
Sbjct 6749486 TGAGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACGGCAGCGAAGG 6749427
Query 33446 C 33446
|
Sbjct 6749426 C 6749426
>seq141
Length=6018405
Score = 107 bits (118), Expect = 2e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387
|| ||||| || || ||||| ||||||||||| ||||| ||||| || || | || ||
Sbjct 2339024 TCATCTCTGCTGATGAGTTCATTGGAAAACGTAAGTCCAGGCATGAGACCTCTTTTCTTT 2338965
Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446
||||||||||| | ||| || ||||| || ||||| || |||||||| |||||||| ||
Sbjct 2338964 AGCCAAAATATAGCAGCAAAAGATCCTGAGAAGAAAATCCCTTCTACAGCAGCAAAAGC 2338906
Score = 96.9 bits (106), Expect = 4e-15
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745
|||||||||||||||| ||||| ||||||||||||||||| ||||||| || ||||
Sbjct 2329415 CCAAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCCAATATGTGAGAGATAA 2329356
Query 33746 AATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 33796
|||| || || |||| | | || || ||||| | | || |||||| ||||
Sbjct 2329355 AATACTTCTCCTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTTTGATA 2329305
Score = 84.2 bits (92), Expect = 3e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 33801 TACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATA 33860
||| ||||| ||||||| || ||||||| ||||| ||||||||| ||||| ||||||
Sbjct 2325599 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATGTCAGG 2325540
Query 33861 ATATTGGATTGGGAAAATAACAAATC 33886
||||||||||| || || || ||||
Sbjct 2325539 GTATTGGATTGGAAAGATGACGAATC 2325514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622886595024280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |