Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq101 113 4e-20
seq323 111 1e-19
seq50 105 5e-18
seq39 105 5e-18
seq237 98.7 8e-16
seq161 95.1 1e-14
seq65 87.8 1e-12
>seq101
Length=7325712
Score = 113 bits (124), Expect = 4e-20
Identities = 158/219 (72%), Gaps = 7/219 (3%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||||| |||||||| || || |||||||| || | | || | | ||
Sbjct 127811 CAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 127870
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | ||||||| ||| ||||| || | ||||||||||||
Sbjct 127871 TTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTC 127930
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || |||||| | | | ||||| | | ||||| |||| |||||||
Sbjct 127931 TTGGATCTTGGC--CTTCACAT---TCTCGGTGTCACTGAGCTCCACCTCCAGGGTGATG 127985
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| || |||||||| || || || |||||||||||||||
Sbjct 127986 GTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 128024
>seq323
Length=1159590
Score = 111 bits (122), Expect = 1e-19
Identities = 157/219 (72%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||||| |||||||| || || |||||||| || | | || | | ||
Sbjct 303407 CAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 303466
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | ||||||| ||| ||||| || | |||||| || ||
Sbjct 303467 TTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTATC 303526
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || |||||| | | | ||||| | ||||||| |||| |||||||
Sbjct 303527 TTGGATCTTGGC--CTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 303584
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| || |||||||| || || || |||||||||||||||
Sbjct 303585 GTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 303623
>seq50
Length=12588045
Score = 105 bits (116), Expect = 5e-18
Identities = 156/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||||| |||||||| || || |||||||| || | | || | | | ||
Sbjct 11770644 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATC 11770703
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | ||||||| ||| || || || | ||||||||| ||
Sbjct 11770704 TTCCAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGATCGTGGGGGATGCCCTCTTTATC 11770763
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || |||||| | | | ||||| ||||||| | || |||||||
Sbjct 11770764 TTGGATCTTGGC--CTTCACATTCTCGATGGTGTCATTGGGCTCCACCTTCAAGGTGATG 11770821
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| || |||||||| || || || |||||||||||||||
Sbjct 11770822 GTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 11770860
>seq39
Length=13401118
Score = 105 bits (116), Expect = 5e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| || |||||||| || ||||||||||||| || ||| | |||
Sbjct 1513495 AGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCC 1513436
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| ||||| || ||| | || | || ||| ||||| || | |||||| |||||
Sbjct 1513435 TCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1513376
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | ||| || | | | ||||| | ||||||| |||| |||||||||
Sbjct 1513375 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1513316
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| || ||||| || || || || |||||||||
Sbjct 1513315 TTACCCGTCAGGGTCTTCACGAAGATCTGCATT 1513283
>seq237
Length=2526385
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| || || ||||||||||| || ||||||||||||| || ||| | ||
Sbjct 2103813 CAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATC 2103872
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
||||| ||||| || ||| | || | || ||| ||||| || | ||||||||| ||
Sbjct 2103873 CTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTCTC 2103932
Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
||| | | ||||| | | | ||||| | ||||||| |||| |||||||||
Sbjct 2103933 TTGAATCTTCCCTTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 2103992
Query 16903 TTTTCCGGTCAGCGTTTTGACAAA 16926
|| || ||||| || || || ||
Sbjct 2103993 CTTACCCGTCAGGGTCTTCACGAA 2104016
>seq161
Length=5000004
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || || ||||| || || |||||||| || | | || | | ||
Sbjct 410101 AGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 410042
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|| | || ||||| ||| | ||||||| ||| ||||| || | |||||| || ||
Sbjct 410041 TCTAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCT 409982
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || ||| ||||| | | | ||||| | ||||||| |||| ||||||||
Sbjct 409981 TGGATCTTGGCT--TTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 409924
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
| || |||||||| || || || |||||||||||||||
Sbjct 409923 TCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 409886
>seq65
Length=10028950
Score = 87.8 bits (96), Expect = 1e-12
Identities = 117/161 (73%), Gaps = 4/161 (2%)
Strand=Plus/Minus
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| |||| || ||||| ||| | ||||||| ||| ||||| || | ||||||||||
Sbjct 4317675 TCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTG 4317616
Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898
|| || || || |||||| | | | ||||| | ||||||| |||| |||||
Sbjct 4317615 TCTTGGATCTTGGC--CTTCACATTATCGATGGTGTCACTGGGCTCCACCTCCAGGGTGA 4317558
Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|||| || | |||||| || || || |||||||||||| ||
Sbjct 4317557 TGGTCTTGCAGGTCAGGGTCTTCACGAAAATCTGCATTCTG 4317517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405049575251170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |