Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq101 113 4e-20 seq323 111 1e-19 seq50 105 5e-18 seq39 105 5e-18 seq237 98.7 8e-16 seq161 95.1 1e-14 seq65 87.8 1e-12 >seq101 Length=7325712 Score = 113 bits (124), Expect = 4e-20 Identities = 158/219 (72%), Gaps = 7/219 (3%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| |||||||| || || |||||||| || | | || | | || Sbjct 127811 CAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 127870 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | ||||||| ||| ||||| || | |||||||||||| Sbjct 127871 TTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTC 127930 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | ||||| | | ||||| |||| ||||||| Sbjct 127931 TTGGATCTTGGC--CTTCACAT---TCTCGGTGTCACTGAGCTCCACCTCCAGGGTGATG 127985 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || |||||||| || || || ||||||||||||||| Sbjct 127986 GTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 128024 >seq323 Length=1159590 Score = 111 bits (122), Expect = 1e-19 Identities = 157/219 (72%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| |||||||| || || |||||||| || | | || | | || Sbjct 303407 CAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 303466 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | ||||||| ||| ||||| || | |||||| || || Sbjct 303467 TTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTATC 303526 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | ||||| | ||||||| |||| ||||||| Sbjct 303527 TTGGATCTTGGC--CTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 303584 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || |||||||| || || || ||||||||||||||| Sbjct 303585 GTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 303623 >seq50 Length=12588045 Score = 105 bits (116), Expect = 5e-18 Identities = 156/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| |||||||| || || |||||||| || | | || | | | || Sbjct 11770644 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATC 11770703 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | ||||||| ||| || || || | ||||||||| || Sbjct 11770704 TTCCAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGATCGTGGGGGATGCCCTCTTTATC 11770763 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | ||||| ||||||| | || ||||||| Sbjct 11770764 TTGGATCTTGGC--CTTCACATTCTCGATGGTGTCATTGGGCTCCACCTTCAAGGTGATG 11770821 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || |||||||| || || || ||||||||||||||| Sbjct 11770822 GTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 11770860 >seq39 Length=13401118 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||| || ||||||||||||| || ||| | ||| Sbjct 1513495 AGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCC 1513436 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| ||||| || ||| | || | || ||| ||||| || | |||||| ||||| Sbjct 1513435 TCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1513376 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | ||| || | | | ||||| | ||||||| |||| ||||||||| Sbjct 1513375 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1513316 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || || ||||| || || || || ||||||||| Sbjct 1513315 TTACCCGTCAGGGTCTTCACGAAGATCTGCATT 1513283 >seq237 Length=2526385 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| || || ||||||||||| || ||||||||||||| || ||| | || Sbjct 2103813 CAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATC 2103872 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 ||||| ||||| || ||| | || | || ||| ||||| || | ||||||||| || Sbjct 2103873 CTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTCTC 2103932 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||| | | ||||| | | | ||||| | ||||||| |||| ||||||||| Sbjct 2103933 TTGAATCTTCCCTTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 2103992 Query 16903 TTTTCCGGTCAGCGTTTTGACAAA 16926 || || ||||| || || || || Sbjct 2103993 CTTACCCGTCAGGGTCTTCACGAA 2104016 >seq161 Length=5000004 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || ||||| || || |||||||| || | | || | | || Sbjct 410101 AGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 410042 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| ||| | ||||||| ||| ||||| || | |||||| || || Sbjct 410041 TCTAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCT 409982 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| ||||| | | | ||||| | ||||||| |||| |||||||| Sbjct 409981 TGGATCTTGGCT--TTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 409924 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || |||||||| || || || ||||||||||||||| Sbjct 409923 TCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 409886 >seq65 Length=10028950 Score = 87.8 bits (96), Expect = 1e-12 Identities = 117/161 (73%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || |||| || ||||| ||| | ||||||| ||| ||||| || | |||||||||| Sbjct 4317675 TCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTG 4317616 Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898 || || || || |||||| | | | ||||| | ||||||| |||| ||||| Sbjct 4317615 TCTTGGATCTTGGC--CTTCACATTATCGATGGTGTCACTGGGCTCCACCTCCAGGGTGA 4317558 Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| || | |||||| || || || |||||||||||| || Sbjct 4317557 TGGTCTTGCAGGTCAGGGTCTTCACGAAAATCTGCATTCTG 4317517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405049575251170