Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq65 116 3e-21
seq50 98.7 9e-16
seq161 82.4 7e-11
>seq65
Length=10028950
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| ||||||| || ||||||| | || |||||| | |
Sbjct 4317956 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACTCTGGAGGTGGAGCCCAGT 4318015
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || | ||| | || ||| ||||||||||| || || ||||||||
Sbjct 4318016 GACACCATTGAAAATGTAAAGGACAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCAG 4318075
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || |||| ||||| ||||| || | ||||||| |||||| | ||||||||
Sbjct 4318076 CAGAGGCTTATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGCACTCTTTCTGATTACAAC 4318135
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || ||||| ||||| || ||| | || ||
Sbjct 4318136 ATCCAGAAAGAGTCCACCCTGCATCTGGTCCT 4318167
Score = 84.2 bits (92), Expect = 2e-11
Identities = 98/131 (75%), Gaps = 1/131 (1%)
Strand=Plus/Plus
Query 25096 AAGAAGGG-ATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGAT 25154
||| |||| || || |||||||| ||| || |||| ||||| ||||| || | ||||||
Sbjct 4317824 AAGGAGGGCATCCCCCCTGACCAGCAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGAT 4317883
Query 25155 GATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGG 25214
| || ||| | |||||||| || || ||||||||||| || ||| | || || ||
Sbjct 4317884 GGCCGTACTCTTTCTGATTACAACATCCAGAAAGAATCCACTCTGCATCTGGTCCTTCGG 4317943
Query 25215 CTAAGAGGAGG 25225
|| ||||| ||
Sbjct 4317944 CTGAGAGGTGG 4317954
>seq50
Length=12588045
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || || || ||||| ||||||| || ||||||| | | |||||| |
Sbjct 11770857 AATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCTTGAAGGTGGAGCCCAA 11770798
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||| |||||| ||||| || ||| || ||||| || || || | || ||
Sbjct 11770797 TGACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCACGATCA 11770738
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || |||| ||||||||||| || | ||||||| | |||| | ||||||||
Sbjct 11770737 GCAGAGGCTTATCTTTGCCGGCAAGCAGCTGGAAGATGGCCACACTCTTTCTGATTACAA 11770678
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
|| || ||||| ||||| || ||
Sbjct 11770677 CATCCAGAAAGAGTCCACCCTGCA 11770654
Score = 87.8 bits (96), Expect = 2e-12
Identities = 142/203 (70%), Gaps = 1/203 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||| || || ||||||| | || |||||| | |
Sbjct 11770400 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCCAGT 11770341
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || | ||| || ||| || ||||| || || || | ||||||
Sbjct 11770340 GACACCATTGAAAATGTAAAGGCCAAGATCCAAGATAAAGAGGGCATCCC-CGTGACCAG 11770282
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || |||| ||||||||||| || ||||||||| ||||| | ||||||||
Sbjct 11770281 CAGAGGCTTATCTTTGCCGGCAAGCAGCTAGAAGATGGCTGCACTCTTTCTGATTACAAC 11770222
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || ||||| || || || ||
Sbjct 11770221 ATCCAGAAAGAGTCAACTCTCCA 11770199
>seq161
Length=5000004
Score = 82.4 bits (90), Expect = 7e-11
Identities = 139/200 (70%), Gaps = 1/200 (1%)
Strand=Plus/Plus
Query 25002 CAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGAC 25061
|| || || || ||||| |||| || || ||||||| | || |||||| | ||||
Sbjct 410121 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCCAGTGAC 410180
Query 25062 ACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAG 25121
|| || || | ||| || ||| || ||||| || || || | |||||| |||
Sbjct 410181 ACCATTGAAAATGTAAAGGCCAAGATCCAAGATAAAGAGGGCATCCC-CGTGACCAGCAG 410239
Query 25122 CGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATT 25181
|| |||| ||||||||||| || ||||||||| ||||| | |||||||| ||
Sbjct 410240 AGGCTTATCTTTGCCGGCAAGCAGCTAGAAGATGGCTGCACTCTTTCTGATTACAACATC 410299
Query 25182 CAAAAAGAATCCACGCTACA 25201
|| ||||| || || || ||
Sbjct 410300 CAGAAAGAGTCAACTCTCCA 410319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433286896537145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |