Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq17 91.5 2e-13 >seq17 Length=19722643 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||| || || | || || | ||| || |||||||||||||| ||||| || ||| Sbjct 6749526 TCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCTTGAGCCAGAATATCGACGCA 6749467 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||| ||||||||| || || ||||||||||| || || ||||||| ||||| Sbjct 6749466 AAAGAACCAGAAAAGAAGATTCCTTCCACGGCAGCGAAGGCCACAACCCGTTC 6749414 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 |||||| ||||| || || || | ||| ||||| || ||||||| || ||||| Sbjct 6747135 GAATCTTTAATGTAAGTGTCAATGAGGAGACTGTACATCTCCGAATGGATGTTTTCCATG 6747076 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462 ||||||||||| || |||||||| | ||||| |||||||| |||||||| Sbjct 6747075 GCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTGATCTGAACTTCTTG 6747026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556806624404920