Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq323 109 5e-19 seq161 109 5e-19 seq65 109 5e-19 seq2 107 2e-18 seq50 105 6e-18 seq125 100 2e-16 seq101 98.7 8e-16 seq39 86.0 5e-12 >seq323 Length=1159590 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || ||||| ||||| || || || | ||||| || || |||| || || ||||| Sbjct 303625 GTCAAAATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAG 303566 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 ||| || ||| | || || | || || || ||||| |||||||| || || ||| Sbjct 303565 CCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCC 303506 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || | ||||| ||||| ||||| ||| | || ||| |||||| | || ||| Sbjct 303505 GACCAGCAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAT 303446 Query 22393 TACAACATTCAAAAAGAATCCAC 22415 |||||||| || ||||| ||||| Sbjct 303445 TACAACATCCAGAAAGAGTCCAC 303423 >seq161 Length=5000004 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || ||||| ||||| || || || | ||||| || || |||| || || ||||| Sbjct 409884 GTCAAAATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAG 409943 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 ||| || ||| | || || | ||| || || ||||| |||||||| || || || Sbjct 409944 CCCAGTGACACCATCGAAAATGTGAAAGCCAAGATCCAAGATAAGGAGGGCATCCCCCCT 410003 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || | ||||| ||||| ||||| ||| |||| ||| |||||| | || ||| Sbjct 410004 GACCAGCAGAGGCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGCCGCACTCTTTCTGAT 410063 Query 22393 TACAACATTCAAAAAGAATCCAC 22415 |||||||| || ||||| || || Sbjct 410064 TACAACATCCAGAAAGAGTCAAC 410086 >seq65 Length=10028950 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || ||||||| || ||||| ||| Sbjct 4317956 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACTCTGGAGGTGGAGCCCAGT 4318015 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || | || || |||||||| || || || || || || || Sbjct 4318016 GACACCATTGAAAATGTAAAGGACAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCAG 4318075 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||| ||||| ||| | || ||| |||||| | || ||||||||| Sbjct 4318076 CAGAGGCTTATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGCACTCTTTCTGATTACAAC 4318135 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 || || ||||| |||||| | ||| | || |||| Sbjct 4318136 ATCCAGAAAGAGTCCACCCTGCATCTGGTCCTGCG 4318170 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || ||||| | | Sbjct 4318184 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCTAGT 4318243 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || ||||| |||||||| || || || || || Sbjct 4318244 GACACCATTGAAAATGTAAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCAG 4318303 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||| ||||| ||| |||| ||| |||||| | || ||||||||| Sbjct 4318304 CAGAGGCTTATCTTTGCAGGCAAGCAGCTAGAAGATGGCCGCACTCTTTCTGATTACAAC 4318363 Query 22399 ATTCAAAAAGAATCCAC 22415 || || ||||| || || Sbjct 4318364 ATCCAGAAAGAGTCAAC 4318380 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||| |||||||| || || || || || || | ||||| ||||| ||||| Sbjct 4317812 AAGATCCAAGATAAGGAGGGCATCCCCCCTGACCAGCAGAGGCTTATCTTTGCTGGCAAG 4317871 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || ||| ||| || | || ||||||||||| || ||||||||||| Sbjct 4317872 CAGCTGGAAGATGGCCGTACTCTTTCTGATTACAACATCCAGAAAGAATCCAC 4317924 >seq2 Length=40953715 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| ||||| || ||||| | || || || || | ||||| || || ||| || | Sbjct 19232598 GATGCAGATTTTCGTAAAAACCCTTACGGGGAAGACCATTACTCTCGAGGTTGAACCCTC 19232539 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || || | || ||| ||||| |||||||| || ||||| || ||||| Sbjct 19232538 GGATACAATAGAAAATGTGAAGGCAAAGATTCAGGACAAGGAAGGAATTCCTCCTGATCA 19232479 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| ||||| || | || ||| || || | || || ||||| Sbjct 19232478 GCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 19232419 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||| || ||||| | ||| | || ||| || | || || ||| Sbjct 19232418 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGGT 19232370 >seq50 Length=12588045 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAG-TGGA 22271 || || ||||| ||||| || || || | ||||| || || |||| ||||||| |||| Sbjct 11770862 GTCAAAATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCAC-CTTGAAGGTGGA 11770804 Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331 ||| || ||| | || || | || || || ||||| || ||||| || || | Sbjct 11770803 GCCCAATGACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCA 11770744 Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391 |||||| || | ||||| ||||||||||| ||| | || ||| || ||| | || || Sbjct 11770743 CGATCAGCAGAGGCTTATCTTTGCCGGCAAGCAGCTGGAAGATGGCCACACTCTTTCTGA 11770684 Query 22392 TTACAACATTCAAAAAGAATCCACC 22416 ||||||||| || ||||| |||||| Sbjct 11770683 TTACAACATCCAGAAAGAGTCCACC 11770659 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/197 (70%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || ||||||| || ||||| ||| Sbjct 11770400 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCCAGT 11770341 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || ||||| || ||||| || || | || || Sbjct 11770340 GACACCATTGAAAATGTAAAGGCCAAGATCCAAGATAAAGAGGGCATCCC-CGTGACCAG 11770282 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||||||||| ||| |||| ||| | |||| | || ||||||||| Sbjct 11770281 CAGAGGCTTATCTTTGCCGGCAAGCAGCTAGAAGATGGCTGCACTCTTTCTGATTACAAC 11770222 Query 22399 ATTCAAAAAGAATCCAC 22415 || || ||||| || || Sbjct 11770221 ATCCAGAAAGAGTCAAC 11770205 >seq125 Length=6462000 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || | || || | || || || || |||| ||||| || || ||| Sbjct 2357657 AGATGCAGATCTTCATGAAGACCCTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCCA 2357598 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 ||| ||| | || || ||||| ||||| ||||||||||||| || || || |||| Sbjct 2357597 GCGACACCATTGAGAATGTCAAAGCCAAAATCGAAGACAAGGAGGGCATCCCCCCTGATC 2357538 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || |||| || |||| ||||||||| | || ||| |||| | | || ||| ||| Sbjct 2357537 AGCAGTGTCTGATTTTTGTGGGCAAACAGCTGGAAGATGGCCGCGCTCTGTCAGATCACA 2357478 Query 22397 ACATTCAAAAAGAATCCACC 22416 | || || ||||| ||| || Sbjct 2357477 ATATCCAGAAAGAGTCCGCC 2357458 >seq101 Length=7325712 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || ||||||| || ||||| | | Sbjct 127795 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCTAGT 127736 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| || || ||||| |||||||| || || || || || Sbjct 127735 GACACCATTGAAAATGTGAAAGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCAG 127676 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||| ||||| ||| | || ||| |||||| | || ||||||||| Sbjct 127675 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 127616 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || |||||||| Sbjct 127615 ATCCAGAACGAATCCAC 127599 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/203 (71%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || ||||| ||||| || || || | ||||| || || |||| || || ||||| Sbjct 128026 GTCAAAATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAG 127967 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 || || |||| | | | | || || || |||||||| ||||| || || ||| Sbjct 127966 CTCAGTGACACCGAGAATG---TGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCC 127910 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || | ||||| ||||| ||||| ||| | || ||| |||||| | || ||| Sbjct 127909 GACCAGCAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAT 127850 Query 22393 TACAACATTCAAAAAGAATCCAC 22415 |||||||| || ||||| ||||| Sbjct 127849 TACAACATCCAGAAAGAGTCCAC 127827 >seq39 Length=13401118 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| || |||| || || ||||| ||| Sbjct 1513284 ATGCAGATCTTCGTGAAGACCCTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 1513343 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || || ||||||||||| || || || || || Sbjct 1513344 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 1513403 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || |||||| | |||||| |||||| | ||||| |||||| Sbjct 1513404 CAGAGGTTGATCTTTGCTGGGAAACAGCTGGAGGATGGGCGCACCCTGTCCGACTACAAC 1513463 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 1513464 ATCCAGAAGGAGTCGAC 1513480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419688186569395