Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq323 179 7e-40 seq39 170 4e-37 seq101 168 1e-36 seq50 165 2e-35 seq161 159 6e-34 seq65 154 3e-32 seq237 149 1e-30 seq2 140 6e-28 seq43 100 5e-16 >seq323 Length=1159590 Score = 179 bits (198), Expect = 7e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| |||| ||| || ||||||||||| |||||||| ||||| || || || | Sbjct 303402 AGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 303461 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || || || || || |||||||| || ||||| ||| Sbjct 303462 CCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCC 303521 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 || ||||| ||||| ||||| || |||||||||||| | || || |||| |||| Sbjct 303522 TTATCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 303581 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||| || || || |||||||| ||||| ||||||||| || Sbjct 303582 ATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 303623 >seq39 Length=13401118 Score = 170 bits (188), Expect = 4e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||| | |||| ||| || || ||||| || |||||||| || ||||| || || | | Sbjct 1513501 AGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGC 1513442 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||| || | ||| ||||| || || || | || || ||||| || || ||||| ||| Sbjct 1513441 CCATCCTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCC 1513382 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| ||||||||| |||||||||||| | || || |||| |||| Sbjct 1513381 TTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 1513322 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| || ||||| |||||||| ||||| ||||||||| Sbjct 1513321 ATGGTCTTACCCGTCAGGGTCTTCACGAAGATCTGCATT 1513283 >seq101 Length=7325712 Score = 168 bits (186), Expect = 1e-36 Identities = 173/223 (78%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| |||| ||| || ||||||||||| |||||||| ||||| || || || | Sbjct 127806 AGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 127865 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || || || || || |||||||| || ||||| || Sbjct 127866 CCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCT 127925 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA-TTCTACTTCCAAGGT 68422 |||||||| ||||| ||||| || ||| |||||| |||| || || |||| ||| Sbjct 127926 TTGTCTTGGATCTTGGCCTTCACATTCTC---GGTGTC-ACTGAGCTCCACCTCCAGGGT 127981 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 |||||| || || || |||||||| ||||| ||||||||| || Sbjct 127982 GATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 128024 >seq50 Length=12588045 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 68245 GGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCC 68304 |||||| |||| ||| || ||||||||||| |||||||| ||||| || || || | Sbjct 11770640 GGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGC 11770699 Query 68305 CATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCT 68364 ||||||| | |||||| ||||| || || || || || || ||| | || ||||| || | Sbjct 11770700 CATCTTCCAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGATCGTGGGGGATGCCCTCTT 11770759 Query 68365 TGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGA 68424 | ||||| ||||| ||||| || |||||||||||| | || || | |||||||| Sbjct 11770760 TATCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCATTGGGCTCCACCTTCAAGGTGA 11770819 Query 68425 TGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 |||| || || || |||||||| ||||| ||||||||| || Sbjct 11770820 TGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 11770860 Score = 132 bits (146), Expect = 9e-26 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||||||||||| |||||||| ||||| || || || |||||||| | ||| Sbjct 11770424 GTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCCAGCTG 11770483 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTC-GGGTGGAATGCCTTCCTTGTCTTGAATCT 68376 ||| || || || || || || || ||||| ||| || ||||| || || ||||| |||| Sbjct 11770484 CTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGGGATGCCCTCTTTATCTTGGATCT 11770543 Query 68377 TTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCG 68436 | ||||| || | ||||||||| | || || |||| ||||||||| || || | Sbjct 11770544 TGGCCTTCACATTTTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAG 11770603 Query 68437 TGAGGGTCTTGACGAATATCTGCAT 68461 | |||||||| | ||| ||||| || Sbjct 11770604 TCAGGGTCTTCATGAAGATCTGTAT 11770628 >seq161 Length=5000004 Score = 159 bits (176), Expect = 6e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||||| ||||| || || || | ||||||||| Sbjct 410098 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCT 410039 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || || || || || || || ||||| || || ||||| ||||| ||||| Sbjct 410038 AGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGG 409979 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| || || || ||||||||||| | || || |||| ||||||||| || Sbjct 409978 ATCTTGGCTTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 409919 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || |||||||| ||||| ||||||||| || Sbjct 409918 CCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 409886 >seq65 Length=10028950 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| |||| || || ||||||||||| |||||||| ||||| || || || | Sbjct 4318173 AGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 4318114 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || || || || || ||||| || || |||||||| Sbjct 4318113 CCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCTTCT 4318054 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||| ||||| |||| || || |||||||| | || || |||| ||| Sbjct 4318053 TTGTCTTGGATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTG 4317994 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || |||||||| ||||| |||||||| Sbjct 4317993 ATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 4317956 Score = 116 bits (128), Expect = 7e-21 Identities = 123/162 (76%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || || || || || ||||| || || ||||| || Sbjct 4317678 CCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCT 4317619 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||| ||||| ||||| || ||||||||||| | || || |||| |||| Sbjct 4317618 TTGTCTTGGATCTTGGCCTTCACATTATCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 4317559 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||| || | || |||||||| ||||| ||||||||| || Sbjct 4317558 ATGGTCTTGCAGGTCAGGGTCTTCACGAAAATCTGCATTCTG 4317517 >seq237 Length=2526385 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 68246 GCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCC 68305 ||||| |||| ||| || |||||||| || |||||||| || ||||| || || | ||| Sbjct 2103810 GCGCAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCC 2103869 Query 68306 ATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTT 68365 ||| || | ||| |||||||| || || | || || ||||| || || ||||| || || Sbjct 2103870 ATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTT 2103929 Query 68366 GTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGAT 68425 ||||||||||| | || || |||||||||||| | || || |||| |||||| Sbjct 2103930 CTCTTGAATCTTCCCTTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 2103989 Query 68426 GGTTTTTCCCGTGAGGGTCTTGACGAA 68452 ||| || ||||| |||||||| ||||| Sbjct 2103990 GGTCTTACCCGTCAGGGTCTTCACGAA 2104016 >seq2 Length=40953715 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | ||| || | || || |||||||| ||||| ||||| || || || Sbjct 19232371 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 19232430 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||||| || || || || ||||| || || || || ||| Sbjct 19232431 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 19232490 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| |||||||||||||| || || || || || | | ||| || Sbjct 19232491 ATTCCTTCCTTGTCCTGAATCTTTGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACC 19232550 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| || ||||| ||||| || ||||| |||||||| Sbjct 19232551 TCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTTACGAAAATCTGCAT 19232597 >seq43 Length=13120276 Score = 100 bits (110), Expect = 5e-16 Identities = 156/219 (71%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||| | |||||||| || |||||||||| |||| || ||||| || || || || Sbjct 1400591 AGGCGAAGCACCAAGTGCAGGCTGGACTCTTTCCGGATATTGTAATCTGACAGAGTGCTG 1400532 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||||||| |||| || || || || || || || || || | ||| | || ||| Sbjct 1400531 CCATCTTCTCACTGTTTGCCCGCTAAAATCAGATGCTGCTG-TCAAGGGGA-TCCCCTCC 1400474 Query 68364 TTGTCTTGAATCTTT-GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGT 68422 |||||||| || ||| || ||||| ||| ||||||| | || | | | ||| Sbjct 1400473 TTGTCTTGGATTTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGGTCAAACTTGAGGGT 1400414 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| | ||| | ||||| || ||||| |||||||| Sbjct 1400413 GATGGTCCTGCCCATCAGGGTTTTCACGAAGATCTGCAT 1400375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921532737660760