Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 4e-12 >seq2 Length=40953715 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | ||||| | ||||| || |||||||| | || ||| || | Sbjct 19232597 ATGCAGATTTTCGTAAAAACCCTTACGGGGAAGACCATTACTCTCGAGGTTGAACCCTCG 19232538 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| ||| ||| || || || || | ||| | || Sbjct 19232537 GATACAATAGAAAATGTGAAGGCAAAGATTCAGGACAAGGAAGGAATTCCTCCTGATCAG 19232478 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||| |||||||||||||| ||||| |||||| | ||| || | || ||||| Sbjct 19232477 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 19232418 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| ||||| || ||||||||| | || || Sbjct 19232417 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 19232386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358090829960182