Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq63 147 2e-30 >seq63 Length=10485012 Score = 147 bits (162), Expect = 2e-30 Identities = 274/401 (68%), Gaps = 1/401 (0%) Strand=Plus/Plus Query 20191 GTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATG 20250 ||| || || ||||||||||| || || | || || || || | || || || | || Sbjct 8862464 GTAAATATGTGCATCTCCCAAAGTATGTACGAAGTCACCTGGCTTTAGTCCTGTGATGTG 8862523 Query 20251 AGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCAT 20310 |||| ||| || || | |||| ||||||||| ||||| || || || |||| ||||| Sbjct 8862524 TGCAATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCAT 8862583 Query 20311 GTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACA 20370 ||| || |||||||| |||||||| ||||| || ||||| | | || |||| || || Sbjct 8862584 GTCCCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCATTCACCACGCAAAACTGGCA 8862643 Query 20371 TAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACAT 20430 | || || || || || ||| ||| | | || || ||||| ||| || Sbjct 8862644 GAGGGCATGGCACGGAGGGAGGGCCGTCAGAGGAATATCTTTTGGATTCCAGCCACTCAG 8862703 Query 20431 AATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTC 20490 ||||||||||| |||| || || ||| ||| || | | | || |||||| Sbjct 8862704 GATGATTCTTCTGTCGTTGGGGTT-GGTTTGATTGTGTCAATGACCTTTTGCAGTTGGTC 8862762 Query 20491 AAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCA 20550 | || || |||| ||| || | |||| || | ||| | |||||||| ||| |||| Sbjct 8862763 TACTCCTTGACCTGAATAATCTGAATCCTTATCTATGTATTCTGCCCCAAAATGCTTCCA 8862822 Query 20551 CTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGT 20591 ||| || | ||||| || || |||||||| || |||||| Sbjct 8862823 CTGAAAGACATAAACTGGGCCTAAATCCCCTTCTTTTCTGT 8862863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441329859943720