Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq65 143 3e-29 seq323 136 4e-27 seq2 132 5e-26 seq101 129 6e-25 seq161 125 7e-24 seq50 122 9e-23 seq92 102 8e-17 >seq65 Length=10028950 Score = 143 bits (158), Expect = 3e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || ||||| || ||||||||||| | | ||||| | ||| Sbjct 4318167 AGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 4318108 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || |||| ||||||||| || || || |||||||| ||| Sbjct 4318107 TCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTGTCT 4318048 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || | ||||||| || | || |||| || ||||| || | ||| | |||| Sbjct 4318047 TGGATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTC 4317988 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| || || ||||| || ||||| Sbjct 4317987 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 4317956 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | ||||| | ||||| ||||||||||| Sbjct 4318380 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCTAGCTGCTTGCCT 4318321 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || || || || || || ||||| || || |||| Sbjct 4318320 GCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCCTTT 4318261 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || |||| | ||||| || | || | ||||||||| |||| || Sbjct 4318260 ACATTTTCAATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 4318201 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 4318200 TTCACGAAGATCTGCAT 4318184 Score = 102 bits (112), Expect = 8e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| ||||||||||| ||| | || |||| ||||||||| || || || || ||||| Sbjct 4317675 TCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTG 4317616 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 ||||| || || ||| ||| || | || |||| || ||||| || | || | | Sbjct 4317615 TCTTGGATCTTGGCCTTCACATTATCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 4317556 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||||| ||||| || || |||||||| |||||| Sbjct 4317555 GTCTTGCAGGTCAGGGTCTTCACGAAAATCTGCATT 4317520 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | || |||||||| || ||||||||||| | | || || | || Sbjct 4317940 AAGGACCAGATGCAGAGTGGATTCTTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATC 4317881 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| ||||||||||| ||| | || |||| ||||||||| || || || || || || || Sbjct 4317880 TTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATC 4317821 Query 64351 TTGTATTTT 64359 ||| || || Sbjct 4317820 TTGGATCTT 4317812 >seq323 Length=1159590 Score = 136 bits (150), Expect = 4e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | ||||| | ||||| ||||||||||| Sbjct 303423 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 303482 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| |||||||||||| || || || || || ||||| || || ||| Sbjct 303483 GCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTATCTTGGATCTTGGCCTTC 303542 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | || |||| || ||||| || | || | |||||||||||||| || Sbjct 303543 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 303602 Query 64427 TTTACGAAAATTTGCATTTT 64446 || |||||||| |||||||| Sbjct 303603 TTCACGAAAATCTGCATTTT 303622 >seq2 Length=40953715 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| | ||| ||||||| || || || |||||||||||||| || | Sbjct 19232370 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 19232429 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | ||||| || |||||||| ||| | || || | |||||| || ||||| Sbjct 19232430 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGG 19232489 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || || || || ||| ||| ||| || | |||||| || || || Sbjct 19232490 AATTCCTTCCTTGTCCTGAATCTTTGCCTTCACATTTTCTATTGTATCCGAGGGTTCAAC 19232549 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||| || || | |||||||||||||| ||||| Sbjct 19232550 CTCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTTACGAAAATCTGCAT 19232597 >seq101 Length=7325712 Score = 129 bits (142), Expect = 6e-25 Identities = 149/200 (75%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | ||||| | ||||| ||||||||||| Sbjct 127827 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 127886 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| |||||||||||| || || || ||||| ||||| || || ||| Sbjct 127887 GCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTC 127946 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| | | | || |||| | ||||| || | || | |||||||||||||| || Sbjct 127947 ACA---TTCTCGGTGTCACTGAGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 128003 Query 64427 TTTACGAAAATTTGCATTTT 64446 || |||||||| |||||||| Sbjct 128004 TTCACGAAAATCTGCATTTT 128023 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | || ||||| || || ||||||||||| | | ||||| | || Sbjct 127583 AAGGACCAGATGCAGAGTGGATTCGTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 127642 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| ||||||||||| ||| | || |||| ||||||||| || || || || || || || Sbjct 127643 TTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATC 127702 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 ||| | | || ||||| ||| || | || |||| | ||||| || | ||| | || Sbjct 127703 TTGGA-TCTTGGCTTTCACATTTTCAATGGTGTCACTAGGCTCCACCTCCAGAGTGATGG 127761 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||| |||| || || ||||| || ||||| Sbjct 127762 TCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 127795 >seq161 Length=5000004 Score = 125 bits (138), Expect = 7e-24 Identities = 150/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | ||||| | ||||| ||||||||||| Sbjct 410086 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCTAGCTGCTTGCCA 410027 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || || || || || || ||||| || || ||||| Sbjct 410026 GCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTG-GCTTT 409968 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | || |||| || ||||| || | || | |||||||||||||| || Sbjct 409967 CACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGT 409908 Query 64426 TTTTACGAAAATTTGCATTTT 64446 || |||||||| |||||||| Sbjct 409907 CTTCACGAAAATCTGCATTTT 409887 Score = 113 bits (124), Expect = 5e-20 Identities = 142/194 (73%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | |||| | ||||| |||||||||||| Sbjct 410313 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCTAGCTGCTTGCCG 410254 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| | || || || ||||| ||||| || || |||| Sbjct 410253 GCAAAGATAAGCCTCTGCTGGTCACG-GGGATGCCCTCTTTATCTTGGATCTTGGCCTTT 410195 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || |||| || ||||| || | ||| | ||||||||| |||| || Sbjct 410194 ACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTC 410135 Query 64427 TTTACGAAAATTTG 64440 || ||||| || || Sbjct 410134 TTCACGAAGATCTG 410121 >seq50 Length=12588045 Score = 122 bits (134), Expect = 9e-23 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | ||| | | ||||| |||||||||||| Sbjct 11770660 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCCAGCTGCTTGCCG 11770719 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| |||||| ||| | || || || ||||| ||||| || || ||| Sbjct 11770720 GCAAAGATAAGCCTCTGCTGATCGTGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 11770779 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | || ||| || ||||| | | || | |||||||||||||| || Sbjct 11770780 ACATTCTCGATGGTGTCATTGGGCTCCACCTTCAAGGTGATGGTCTTGCCGGTCAGGGTC 11770839 Query 64427 TTTACGAAAATTTGCATTTT 64446 || |||||||| |||||||| Sbjct 11770840 TTCACGAAAATCTGCATTTT 11770859 Score = 118 bits (130), Expect = 1e-21 Identities = 145/197 (74%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | |||| | ||||| |||||||||||| Sbjct 11770205 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCTAGCTGCTTGCCG 11770264 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| | || || || ||||| ||||| || || |||| Sbjct 11770265 GCAAAGATAAGCCTCTGCTGGTCACG-GGGATGCCCTCTTTATCTTGGATCTTGGCCTTT 11770323 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || |||| || ||||| || | ||| | ||||||||| |||| || Sbjct 11770324 ACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTC 11770383 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 11770384 TTCACGAAGATCTGCAT 11770400 Score = 105 bits (116), Expect = 7e-18 Identities = 152/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || ||||| || | || || ||||| || ||||||||||| | | ||| | | ||| Sbjct 11770416 AGGACTAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCT 11770475 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTC-GGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| ||| |||| |||| ||||||||| ||| || || || ||||| || Sbjct 11770476 TCCAGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGGGATGCCCTCTTTATC 11770535 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || ||| ||| | | || |||| || ||||| || | || | ||| Sbjct 11770536 TTGGATCTTGGCCTTCACATTTTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 11770595 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| |||| || || | ||| || || || Sbjct 11770596 CTTGCCAGTCAGGGTCTTCATGAAGATCTGTAT 11770628 >seq92 Length=7904815 Score = 102 bits (112), Expect = 8e-17 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||| ||||| | |||||||||||||| || ||| | | ||||| ||||||||||| Sbjct 7414234 GTCAATTCTCTCTGAATGTTGTAATCAAAGA--GTGTGACCATCTTCCAGCTGCTTGCCT 7414177 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | | |||| ||||||||| ||| | || || ||||| ||||| || || ||| Sbjct 7414176 GCAGAGGTAAGCCACTGCTGGTCAGGAAGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 7414117 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 |||| || | || |||| || ||||| || | | || ||||||| ||||| || Sbjct 7414116 ACAATTTCGATGGTGTCACTGGTCTCCACCTCCAGCATAACAGTCTTGCTGGTCAGGGTC 7414057 Query 64427 TTTACGAAAATTTGCATTTT 64446 || | | | | |||||||| Sbjct 7414056 TTCATGTAGACCTGCATTTT 7414037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499596190806520