Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 3e-15
seq65 89.7 5e-13
seq39 84.2 2e-11
>seq2
Length=40953715
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||||||||||||||| || |||||| || || ||||| || || | |
Sbjct 19232404 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCA 19232463
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539
|||| || | ||| || || ||||| || ||||| ||||| ||| | |||| || |
Sbjct 19232464 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTGTC-CTGAATCTTTGCCTTCAC 19232522
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
| ||| | || || | | || ||||||| || | || || || || || |||||
Sbjct 19232523 ATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTAATGGTCTTCCCCGTAAGGGTTTT 19232582
Query 138600 TACAAAAATCTGCAT 138614
||| |||||||||||
Sbjct 19232583 TACGAAAATCTGCAT 19232597
>seq65
Length=10028950
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || |||| || | ||| | | | ||||| || || |||||||| ||
Sbjct 4318183 GCCACCCCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGA 4318124
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| || || ||||| || || || | | |||| || | ||| ||||| || ||
Sbjct 4318123 AAGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGG 4318064
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||||||||| ||| || | |||| | ||| | |||||| | | ||||||
Sbjct 4318063 GATGCCTTCTTTGTCTTGGATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTCCAC 4318004
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||| | || | || || || ||||| || || || || |||||||||
Sbjct 4318003 CTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 4317955
>seq39
Length=13401118
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || || ||| ||||| || ||||| || | |
Sbjct 1513477 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCCTCCAGCTGTTTCCCAGCA 1513418
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | | ||| ||||| || || || || || ||||| ||| || || |
Sbjct 1513417 AAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACG 1513358
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | ||||||||| | || | || ||||| ||||| || ||
Sbjct 1513357 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAGGGTCTTC 1513298
Query 138601 ACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 1513297 ACGAAGATCTGCAT 1513284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496214119871760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |