Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq403 170 3e-37 >seq403 Length=533493 Score = 170 bits (188), Expect = 3e-37 Identities = 219/302 (73%), Gaps = 0/302 (0%) Strand=Plus/Plus Query 8875 AACTCGGAACGCGGCCAACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGT 8934 ||| | ||| || | || ||||| |||||||| ||| || ||||| |||||||||| Sbjct 186991 AACACTGAATGCAGTAAAAGGACAGCCCTTCACGTTGTTGCAGATGAGAGACTGAATGGA 187050 Query 8935 TGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGC 8994 || || || | ||| | || ||||| || || ||||| || || || |||||||| | Sbjct 187051 GGCAGTGTTGATGATTTTAAAGCCTACTTCTCCACCGAAAGTACTAGGCTTCCAGTAGTC 187110 Query 8995 CGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGAT 9054 || || |||||| || |||| || ||||||||||| || || || |||| || | Sbjct 187111 AGGCGAACAGATGGGATTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCCATTTCTAC 187170 Query 9055 GATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAG 9114 ||| ||||||| ||||||||| | ||||| || ||||| || | || | | | || || Sbjct 187171 CATGGTCTCACCAAAGATGGCATCTGGACGAGGCTTTTCTACCAGGAGGGCTGGATACAG 187230 Query 9115 TTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACC 9174 || | || |||| || ||||| ||||| || ||| | ||||| || |||||||| || Sbjct 187231 CTCCATGGCATCGATATCTCCATAAAGGGCCTCTAACCCTGCAGCCATTTCCTTCTCTCC 187290 Query 9175 TA 9176 || Sbjct 187291 TA 187292 Score = 123 bits (136), Expect = 4e-23 Identities = 200/286 (70%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495 || ||||| || || |||| ||||| || || |||| | || || | | || || Sbjct 188004 CCAGCAATTTGCCTGCTGAAGGATTCCACAAACTGGGTAAGCCCATGTTCCAGCAGTATA 188063 Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555 || |||||||| || || |||| | || |||| | ||| |||| | ||| ||| Sbjct 188064 GAGTTGTTGTAGACAAACTGTTGGAAATTGTACTCCTGGTCATCTATTTGCAAAGTGTCA 188123 Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615 |||| || | ||||||| ||||||| || || ||||| || || || ||||| |||||| Sbjct 188124 GGCAGAAGGGGATGCCAGTGGTAGAGCGTGTTAAACTCAGCAGCAATACGGTTTTGGTAC 188183 Query 9616 TGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGC 9673 || || | ||| ||| || | ||| |||||||| | |||| |||||| || || | Sbjct 188184 TGGAATTGTTGGTT--GAAAAGCAGCTCTGGGTCAAACTTCAGCTTGAAGTGATAGCCAC 188241 Query 9674 TGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719 | | ||||| ||||| | | || | ||| ||||||||||| || Sbjct 188242 TCAAGTGCTGTACATAGTCTTCAATCACAATCTTAATGGTTTCTCC 188287 Score = 116 bits (128), Expect = 5e-21 Identities = 132/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 10121 TCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCTAAA 10180 |||||||||||| |||| |||| | |||||| | || |||||| ||| ||| | || Sbjct 189602 TCTTACCCCATGGCCCAGTCCTTTGGTGAAACCTGGCCCTCGCTTATGATCTGTCTTGAA 189661 Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240 |||||| || || ||||| || | ||||| || ||||||| || |||||||||||||| Sbjct 189662 AAATTGATGGGTGAAGTGCTGGGCAAAAAATGCAAACATCATATTTGTGCCCTGGGGATC 189721 Query 10241 GGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATCTGTGTTGAATCGGGCAG 10297 || || || | || | | || || ||| |||||||||| | | ||||| || || Sbjct 189722 AGGAATGAACTTTCTTCTTAGAAGAAATTTTTCCACAATCTCTTTAGAATCAGGAAG 189778 Score = 96.9 bits (106), Expect = 5e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 10389 ACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTATA 10448 ||||||||| || | || || || |||||| | || || || |||| ||| ||||| Sbjct 190415 ACCTTTCACACCCATGGGTGTTGGACAGTCATCCGCCACAGGGGGAAGAGCTCTGGTATA 190474 Query 10449 ATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGCGG 10508 ||||| ||||| ||||| ||||||||||| || |||||||| || | ||||| || Sbjct 190475 GTAGGAGAGATTAGAAAAGGCTTCCCAGCTTTTATAGCCATAGTCCACATTGTAAGTTGG 190534 Query 10509 GGGACTGTCAATCATCTCGGACCTGGCT 10536 ||||| ||||| | | ||||||||| Sbjct 190535 TGGACTCTCAATGAAATGTGACCTGGCT 190562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723657590312200