Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq403 170 3e-37
>seq403
Length=533493
Score = 170 bits (188), Expect = 3e-37
Identities = 219/302 (73%), Gaps = 0/302 (0%)
Strand=Plus/Plus
Query 8875 AACTCGGAACGCGGCCAACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGT 8934
||| | ||| || | || ||||| |||||||| ||| || ||||| ||||||||||
Sbjct 186991 AACACTGAATGCAGTAAAAGGACAGCCCTTCACGTTGTTGCAGATGAGAGACTGAATGGA 187050
Query 8935 TGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGC 8994
|| || || | ||| | || ||||| || || ||||| || || || |||||||| |
Sbjct 187051 GGCAGTGTTGATGATTTTAAAGCCTACTTCTCCACCGAAAGTACTAGGCTTCCAGTAGTC 187110
Query 8995 CGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGAT 9054
|| || |||||| || |||| || ||||||||||| || || || |||| || |
Sbjct 187111 AGGCGAACAGATGGGATTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCCATTTCTAC 187170
Query 9055 GATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAG 9114
||| ||||||| ||||||||| | ||||| || ||||| || | || | | | || ||
Sbjct 187171 CATGGTCTCACCAAAGATGGCATCTGGACGAGGCTTTTCTACCAGGAGGGCTGGATACAG 187230
Query 9115 TTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACC 9174
|| | || |||| || ||||| ||||| || ||| | ||||| || |||||||| ||
Sbjct 187231 CTCCATGGCATCGATATCTCCATAAAGGGCCTCTAACCCTGCAGCCATTTCCTTCTCTCC 187290
Query 9175 TA 9176
||
Sbjct 187291 TA 187292
Score = 123 bits (136), Expect = 4e-23
Identities = 200/286 (70%), Gaps = 4/286 (1%)
Strand=Plus/Plus
Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495
|| ||||| || || |||| ||||| || || |||| | || || | | || ||
Sbjct 188004 CCAGCAATTTGCCTGCTGAAGGATTCCACAAACTGGGTAAGCCCATGTTCCAGCAGTATA 188063
Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555
|| |||||||| || || |||| | || |||| | ||| |||| | ||| |||
Sbjct 188064 GAGTTGTTGTAGACAAACTGTTGGAAATTGTACTCCTGGTCATCTATTTGCAAAGTGTCA 188123
Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615
|||| || | ||||||| ||||||| || || ||||| || || || ||||| ||||||
Sbjct 188124 GGCAGAAGGGGATGCCAGTGGTAGAGCGTGTTAAACTCAGCAGCAATACGGTTTTGGTAC 188183
Query 9616 TGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGC 9673
|| || | ||| ||| || | ||| |||||||| | |||| |||||| || || |
Sbjct 188184 TGGAATTGTTGGTT--GAAAAGCAGCTCTGGGTCAAACTTCAGCTTGAAGTGATAGCCAC 188241
Query 9674 TGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719
| | ||||| ||||| | | || | ||| ||||||||||| ||
Sbjct 188242 TCAAGTGCTGTACATAGTCTTCAATCACAATCTTAATGGTTTCTCC 188287
Score = 116 bits (128), Expect = 5e-21
Identities = 132/177 (75%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 10121 TCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCTAAA 10180
|||||||||||| |||| |||| | |||||| | || |||||| ||| ||| | ||
Sbjct 189602 TCTTACCCCATGGCCCAGTCCTTTGGTGAAACCTGGCCCTCGCTTATGATCTGTCTTGAA 189661
Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240
|||||| || || ||||| || | ||||| || ||||||| || ||||||||||||||
Sbjct 189662 AAATTGATGGGTGAAGTGCTGGGCAAAAAATGCAAACATCATATTTGTGCCCTGGGGATC 189721
Query 10241 GGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATCTGTGTTGAATCGGGCAG 10297
|| || || | || | | || || ||| |||||||||| | | ||||| || ||
Sbjct 189722 AGGAATGAACTTTCTTCTTAGAAGAAATTTTTCCACAATCTCTTTAGAATCAGGAAG 189778
Score = 96.9 bits (106), Expect = 5e-15
Identities = 110/148 (74%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 10389 ACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTATA 10448
||||||||| || | || || || |||||| | || || || |||| ||| |||||
Sbjct 190415 ACCTTTCACACCCATGGGTGTTGGACAGTCATCCGCCACAGGGGGAAGAGCTCTGGTATA 190474
Query 10449 ATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGCGG 10508
||||| ||||| ||||| ||||||||||| || |||||||| || | ||||| ||
Sbjct 190475 GTAGGAGAGATTAGAAAAGGCTTCCCAGCTTTTATAGCCATAGTCCACATTGTAAGTTGG 190534
Query 10509 GGGACTGTCAATCATCTCGGACCTGGCT 10536
||||| ||||| | | |||||||||
Sbjct 190535 TGGACTCTCAATGAAATGTGACCTGGCT 190562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723657590312200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |