Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq237 116 2e-21
seq39 114 8e-21
seq65 95.1 8e-15
seq101 89.7 3e-13
seq50 82.4 5e-11
>seq237
Length=2526385
Score = 116 bits (128), Expect = 2e-21
Identities = 159/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| |||||||| | || ||||| ||||| ||| || ||||| ||||| ||||| ||
Sbjct 2103799 CCACCCCTCAAGCGCAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2103858
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| ||||||||||| |||||||| || | | |||||||| | ||
Sbjct 2103859 AGGGTGCGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 2103918
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| ||||| || || ||||||| ||| || || || || | |||| || ||| |
Sbjct 2103919 ATGCCCTCTTTCTCTTGAATCTTCCCTTTCAC--ATTCTCGATGGTGTCACTGGGCTCCA 2103976
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972
| || | ||| ||||| || ||||| || |||||||| ||
Sbjct 2103977 CCTCCAGGGTGATGGTCTTACCCGTCAGGGTCTTCACGAA 2104016
>seq39
Length=13401118
Score = 114 bits (126), Expect = 8e-21
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || ||| | || |||| ||||||||||| || |||||
Sbjct 1513474 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCCTCCAGCTGTTTCCCAGCAAAG 1513415
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| | | |||||||| | || | ||||||||||| |||||| ||||||
Sbjct 1513414 ATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTC 1513355
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | |||| || ||| || || | ||| ||||| || ||||| || ||||||||
Sbjct 1513354 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAGGGTCTTCACG 1513295
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 1513294 AAGATCTGCAT 1513284
>seq65
Length=10028950
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| |||||||| | | ||||| ||| | || |||||||| ||||| || || |||
Sbjct 4318410 CCACCCCTCAAACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 4318351
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || |||| || ||||| || || ||||| || || | |||||||| | ||
Sbjct 4318350 AGAGTGCGGCCATCTTCTAGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 4318291
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| |||||||| || ||||| || || | | || | |||| | ||| ||
Sbjct 4318290 ATGCCCTCCTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTAGGCTCCACC 4318231
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | ||| ||||| || || || || |||||||| |||||||||||
Sbjct 4318230 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 4318184
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || |||| || | ||| |||||||| ||||| || || |||
Sbjct 4318182 CCACCCCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 4318123
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || |||| || ||||| || || ||||| || || | |||||||| | ||
Sbjct 4318122 AGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 4318063
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || || ||||| ||||| | || || | | || | |||| || ||| ||
Sbjct 4318062 ATGCCTTCTTTGTCTTGGATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTCCACC 4318003
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | || ||||| || || || || |||||||| |||||||||||
Sbjct 4318002 TCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 4317956
>seq101
Length=7325712
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| || || ||||| | || |||| |||||||| || || |||||
Sbjct 127604 TTCGTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 127663
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | |||||||| | || | |||||||| || ||||| ||| ||
Sbjct 127664 GATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCTTTCACATT 127723
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | |||| | ||| || || | || ||||| || || || || ||||||||
Sbjct 127724 TTCAATGGTGTCACTAGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCAC 127783
Query 34970 AAAGATCTGCAT 34981
|||||||||||
Sbjct 127784 GAAGATCTGCAT 127795
>seq50
Length=12588045
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/227 (68%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | | ||||| ||| | || |||||||| ||||| || || |||
Sbjct 11770175 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 11770234
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | | |||| || ||||| || |||||||| || || | |||||||| | ||
Sbjct 11770235 AGAGTGCAGCCATCTTCTAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCACGGGG- 11770293
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||| || || ||||| || || | | || | |||| || ||| ||
Sbjct 11770294 ATGCCCTCTTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTGGGCTCCACC 11770353
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | || ||||| || || || || |||||||| |||||||||||
Sbjct 11770354 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 11770400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324602806778424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |