Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq141 120 4e-22
seq17 84.2 3e-11
>seq141
Length=6018405
Score = 120 bits (132), Expect = 4e-22
Identities = 101/124 (81%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257
|||||||||| || || | |||||| ||||| || | ||| ||||| | ||||||||| |
Sbjct 2339026 CTTCATCTCTGCTGATGAGTTCATTGGAAAACGTAAGTCCAGGCATGAGACCTCTTTTCT 2338967
Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317
| | ||||||||| || ||||||||||| || |||||||| ||||| || || ||||| |
Sbjct 2338966 TTAGCCAAAATATAGCAGCAAAAGATCCTGAGAAGAAAATCCCTTCTACAGCAGCAAAAG 2338907
Query 37318 CTAC 37321
||||
Sbjct 2338906 CTAC 2338903
>seq17
Length=19722643
Score = 84.2 bits (92), Expect = 3e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259
|||||||| || || | |||||| ||||| || | || ||||| | || | ||| ||
Sbjct 6749544 TCATCTCTGCTGATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCTTG 6749485
Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319
| ||| ||||| | |||||||| ||||||||||| || ||||| || || || || ||
Sbjct 6749484 AGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACGGCAGCGAAGGCC 6749425
Query 37320 ACAA 37323
||||
Sbjct 6749424 ACAA 6749421
Score = 82.4 bits (90), Expect = 9e-11
Identities = 76/94 (81%), Gaps = 2/94 (2%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930
||| |||||||| | ||||| || || |||| |||| || || || || ||||| ||||
Sbjct 6750984 CATCACTCCCATCCTCTGATACTCGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTCCCTT 6750926
Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964
| ||||| ||||| |||||||| |||||||||||
Sbjct 6750925 CCAGTGAAATATTCTCCATAAAGTCAAATGGATT 6750892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592259174979320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |