Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq65 118 8e-22 seq50 100 2e-16 seq161 89.7 4e-13 >seq65 Length=10028950 Score = 118 bits (130), Expect = 8e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| || ||||| || || |||||||| | | ||| | | |||| || | || Sbjct 4318159 ATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCGAGCTG 4318100 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| || | | ||| || || || || ||||||||||| ||||| || || Sbjct 4318099 CTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTT 4318040 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | |||||| |||| | |||||| | ||||| || ||||||| || |||||||| Sbjct 4318039 GTCCTTTACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCGGT 4317980 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || || || ||||||||| Sbjct 4317979 CAGGGTCTTCACGAAGATCTGCATG 4317955 >seq50 Length=12588045 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || |||||||| | | ||| | |||| |||| ||| Sbjct 11770654 TGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCCAGCTGC 11770713 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | | ||| |||||| | || ||||| ||||||||||| || || Sbjct 11770714 TTGCCGGCAAAGATAAGCCTCTGCTGATCGTGGGGGATGCCCTCTTTATCTTGGATCTTG 11770773 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCA-CTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | |||||| | |||| ||||||| |||| || |||||||| Sbjct 11770774 GCCTTCACATTCTCGATGGTGTCATTGGGCTCCACCTTCAAG-GTGATGGTCTTGCCGGT 11770832 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 11770833 CAGGGTCTTCACGAAAATCTGCAT 11770856 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || | ||| | ||| | || || || || ||||| || || |||||||| | Sbjct 11770175 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 11770234 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | ||||| || ||||| || | | ||| || || | ||| Sbjct 11770235 AGAGTGCAGCCATCTTCTAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCACGGGGA 11770294 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||| ||||||||||| || || |||||| |||| | |||||| | ||||| Sbjct 11770295 -TGCCCTCTTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTGGGCTCCACC 11770353 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||||| || ||||| || | || || || || ||||||||| Sbjct 11770354 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 11770401 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 |||| || ||||| || ||||| || || |||||||| | | ||| | |||| ||| Sbjct 11770419 ACTAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCC 11770478 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATC-GGGCGGAATGCCTTCTTTATCTTG 101379 | ||||| || ||||| || | | ||| || || ||| || ||||| ||||||||||| Sbjct 11770479 AGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGGGATGCCCTCTTTATCTTG 11770538 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || ||| ||| | |||||| | ||||| || || |||| || || Sbjct 11770539 GATCTTGGCCTTCACATTTTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 11770598 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||| || | || || | || ||||| ||| Sbjct 11770599 GCCAGTCAGGGTCTTCATGAAGATCTGTATG 11770629 >seq161 Length=5000004 Score = 89.7 bits (98), Expect = 4e-13 Identities = 155/224 (69%), Gaps = 1/224 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || | ||| | ||| | || || || || ||||| || || |||||||| | Sbjct 410343 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 410284 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | ||||| || ||||| || | | ||| || || | ||| Sbjct 410283 AGAGTGCAGCCATCTTCTAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCACGGGGA 410224 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||| ||||||||||| || || |||||| |||| | |||||| | ||||| Sbjct 410223 -TGCCCTCTTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTGGGCTCCACC 410165 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTG 101466 || ||||||| || ||||| || | || || || || ||||| Sbjct 410164 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTG 410121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396240810888531