Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq171 408 5e-109
seq81 163 3e-35
seq129 111 2e-19
>seq171
Length=4644964
Score = 408 bits (452), Expect = 5e-109
Identities = 680/982 (69%), Gaps = 3/982 (0%)
Strand=Plus/Minus
Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111
||| || || |||| ||| |||| ||| || | ||||||||| |||||| || || ||
Sbjct 1298510 CAGGTGCTCATCCAAACACTGGATGGCAAAGAGGTCAACGTCCGTGTCGAACTTGTTGGC 1298451
Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171
|||| ||||| || | || ||||||| || ||| || | |||||||||||| ||
Sbjct 1298450 AAACAAGTGGTGC---TTGCGGAGCATCCAGTTCAAGTCACCTGCCCCGAACACGCACAC 1298394
Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231
|||||| | ||| ||||| |||| || ||||| | || || || | || ||||| ||
Sbjct 1298393 GGAACGCACGTGGACGCCACTGCAGGGTGGGTAGGGGGCACCCTTGGAAACATCACCCTC 1298334
Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291
| ||||||||||||| |||||||| || ||||| |||||||| || ||||||| || |
Sbjct 1298333 GAAGTACTGCCACTTGACAAACCTCGCAATCGCGTGCATGTCAGACATGTCGTACTTCTG 1298274
Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351
| | || | || || || || | || || | ||| | ||||||||| || | ||
Sbjct 1298273 GCTTAAGGACAGGGAGCCTGGGACATCTGGGATCCTCTGAATGGTGGCCCAGAGATACTC 1298214
Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411
||||||||||| ||||| || | ||| ||||| |||| | |||| || | ||
Sbjct 1298213 ATCGGGGCTGTAGGTGTCTTTTGCCCACTCCATAAACTTTTGGATTTTTTCGTTCTCTAG 1298154
Query 160412 AACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTAT 160471
|| | ||||| || | || ||||| || || ||||| ||||| | || |
Sbjct 1298153 CACATACTCCACGTACTTCCTACTGACCACAAAATAGGCACTGCCTGAGAACAGGGGAGT 1298094
Query 160472 GGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCGC 160531
| ||| ||| |||||| || ||||| | || | ||| || || | ||
Sbjct 1298093 TTCAAGAGGGGGCTGCATTTTGTCGGTCCCTGTGTTCGTCAGCTTTCCGTTAACAACCGT 1298034
Query 160532 GTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGTT 160591
| |||| |||||||| | | |||| | |||||| | || || ||||| ||||
Sbjct 1298033 ATAATGCTTTTTCCACCTTTCTTTTTTGTTGGATGGCATCCTCTCGGTTTCTAGGTTGTT 1297974
Query 160592 GGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTC 160651
|||| || || || |||| | ||| || || | ||| || || | ||||| ||
Sbjct 1297973 TTCACCCATTAGTGACTTGAGCTTCCGGACAATTTCCAAGTTGGTTTTAATAGGAAAATC 1297914
Query 160652 GGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCAT 160711
||||||| | ||||||| ||||||||| | || |||| || |||||| |||
Sbjct 1297913 CATACCGCAGAGATTTATCAAGTACTTCCAGTCTGCCCTCATCCTGTAGAGGTCCTGCAT 1297854
Query 160712 GCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACT 160771
||| || | || ||||| || |||||||| || |||||||| || |||| || | |||
Sbjct 1297853 GCAGTTGAGGTCGGCCTGAACCCGGCTCCACGAGGCGTACACCACACTCTCCAGCTGACT 1297794
Query 160772 GGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAACATCTT 160831
|||||| ||||| ||| ||| || ||| |||| |||| |||||| ||||| |
Sbjct 1297793 GGCCACGAAGACATTACTGAAGCAGGACGCGATGCCCAGCACCGCGGCCAAGAAGGAATC 1297734
Query 160832 ATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAG 160891
|| | |||| ||||||||| | ||| || | ||||| ||||||||||||||||| ||
Sbjct 1297733 CTCTGATTTTCTGTCCACGTGAATGCAGTAGAAATTCTGGGGCGCGTAGATGGCCCTCAG 1297674
Query 160892 CAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACTC 160951
| ||| || | ||| || || || ||||||| ||| ||||| || || || ||||| ||
Sbjct 1297673 GAGCCTGTCAAGCATTTCAATTTTGTGATGGACCACTATAGAATATGCGATGGGAAATTC 1297614
Query 160952 GGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAATCACA 161011
| ||| || ||| | || | || | || || |||| |||||| ||| | |||
Sbjct 1297613 TGCCTCTTCTTTACTAAAGGGCTGTGTGATATATTTGCGCGCCTTGATGAAAGCGTGACA 1297554
Query 161012 ATCCCGCGTCATGTTGATATAC 161033
||| | |||||||| || |||
Sbjct 1297553 ATCTCTGGTCATGTTTATGTAC 1297532
>seq81
Length=8639600
Score = 163 bits (180), Expect = 3e-35
Identities = 210/290 (72%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 168153 AGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATG 168212
|| || | ||| | | |||| || ||||| || || || || || |||||||||||| ||
Sbjct 6611951 AGGGTGAGGCAGGCTATTCCTGAGATCTTCCCAGAACCAAAAGTATTGAAGAGGCACTTG 6612010
Query 168213 AAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCC 168272
| || ||||| ||||||| |||||||||||| || || | |||||||| ||| ||
Sbjct 6612011 TAACACCCTTCATCCTCCAGGGTGGTATTCCAGAACGTGATGGTTGAGTTCTTGAGTTCC 6612070
Query 168273 AACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCG 168332
| || || ||||| | || ||||| | || || || ||||| || ||||||| |
Sbjct 6612071 AGCTCAGTGATGTTTATCTTGTCCTTATAGGCGGGCTGGACCACAACCCCATGGTTCTTG 6612130
Query 168333 CTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGA 168392
||||||||| ||||||| || ||||| | ||| || |||||||| || || ||||
Sbjct 6612131 CTGAAGGTGACCATGTTTTCTGGGCTAACAGGCTTGATTTTCTGCCATGTCACAATCAAG 6612190
Query 168393 ACCTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAG 168442
|| || | | | ||||| || ||||| | ||||| || ||||||||
Sbjct 6612191 ACTTCCTCAGAATTTTGCAGAGAGCATCTTAAGGAAGCAGGTGTGTTCAG 6612240
Score = 91.5 bits (100), Expect = 2e-13
Identities = 137/194 (71%), Gaps = 3/194 (2%)
Strand=Plus/Plus
Query 167907 CCCAAATGTAGTACCTTGCATATCACCTCTCCGTTTCCTACTTGACTCTTTGGATCTTTT 167966
|||| || || |||| ||| | |||||| || || || |||||||| || |||||
Sbjct 6609289 CCCAGGTGAAGCACCTGGCAGACCACCTCC---TTCCCCACCTGACTCTTGGGGTCTTTG 6609345
Query 167967 ACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTGCGATGTAAAACGGTTTTCGTGCTG 168026
|| || | | ||| || ||| ||| || |||||| | || | | | || |||
Sbjct 6609346 ACCTGAAGGACGCTCGTGACAGATGTGGTCCCATTGGGGTGGGAGAGAACCTCAGTACTG 6609405
Query 168027 TTCTCAATCCCTGATCCTGCCACCTTCCAGAATATTACAGGAGCGGGTCGTGCTGTAGCA 168086
|| ||||||||||| || | |||||||||| | || ||||| || || || || | |||
Sbjct 6609406 TTGTCAATCCCTGACCCAGACACCTTCCAGGAGATCACAGGGGCTGGGCGGGCATTGGCA 6609465
Query 168087 GAGCAGGTAATATT 168100
||||| || |||||
Sbjct 6609466 GAGCAAGTGATATT 6609479
>seq129
Length=6421872
Score = 111 bits (122), Expect = 2e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291
||||| || |||| |||| || |||| |||||| | ||||| || |||| | || |
Sbjct 700636 AGATACTTGGCTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCT 700577
Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351
||||| || || |||||||||| || || || || | ||| | ||||| | | |||
Sbjct 700576 GGAATATAATTCTCATAATTTTCCCTAGATGGCCCCAGAACAACAGGTACAGAGCCAGCT 700517
Query 176352 AATAATGAGCGGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCT 176411
|| || | |||| |||||||| |||||| || |||| ||||||||||||||||
Sbjct 700516 AAAAAAGCATTATAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAAGAA 700457
Query 176412 AAATAGAACTTACA 176425
| |||||| || ||
Sbjct 700456 AGATAGAATTTGCA 700443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577163043787080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |