Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq171 408 5e-109 seq81 163 3e-35 seq129 111 2e-19 >seq171 Length=4644964 Score = 408 bits (452), Expect = 5e-109 Identities = 680/982 (69%), Gaps = 3/982 (0%) Strand=Plus/Minus Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111 ||| || || |||| ||| |||| ||| || | ||||||||| |||||| || || || Sbjct 1298510 CAGGTGCTCATCCAAACACTGGATGGCAAAGAGGTCAACGTCCGTGTCGAACTTGTTGGC 1298451 Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171 |||| ||||| || | || ||||||| || ||| || | |||||||||||| || Sbjct 1298450 AAACAAGTGGTGC---TTGCGGAGCATCCAGTTCAAGTCACCTGCCCCGAACACGCACAC 1298394 Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231 |||||| | ||| ||||| |||| || ||||| | || || || | || ||||| || Sbjct 1298393 GGAACGCACGTGGACGCCACTGCAGGGTGGGTAGGGGGCACCCTTGGAAACATCACCCTC 1298334 Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291 | ||||||||||||| |||||||| || ||||| |||||||| || ||||||| || | Sbjct 1298333 GAAGTACTGCCACTTGACAAACCTCGCAATCGCGTGCATGTCAGACATGTCGTACTTCTG 1298274 Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351 | | || | || || || || | || || | ||| | ||||||||| || | || Sbjct 1298273 GCTTAAGGACAGGGAGCCTGGGACATCTGGGATCCTCTGAATGGTGGCCCAGAGATACTC 1298214 Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411 ||||||||||| ||||| || | ||| ||||| |||| | |||| || | || Sbjct 1298213 ATCGGGGCTGTAGGTGTCTTTTGCCCACTCCATAAACTTTTGGATTTTTTCGTTCTCTAG 1298154 Query 160412 AACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTAT 160471 || | ||||| || | || ||||| || || ||||| ||||| | || | Sbjct 1298153 CACATACTCCACGTACTTCCTACTGACCACAAAATAGGCACTGCCTGAGAACAGGGGAGT 1298094 Query 160472 GGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCGC 160531 | ||| ||| |||||| || ||||| | || | ||| || || | || Sbjct 1298093 TTCAAGAGGGGGCTGCATTTTGTCGGTCCCTGTGTTCGTCAGCTTTCCGTTAACAACCGT 1298034 Query 160532 GTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGTT 160591 | |||| |||||||| | | |||| | |||||| | || || ||||| |||| Sbjct 1298033 ATAATGCTTTTTCCACCTTTCTTTTTTGTTGGATGGCATCCTCTCGGTTTCTAGGTTGTT 1297974 Query 160592 GGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTC 160651 |||| || || || |||| | ||| || || | ||| || || | ||||| || Sbjct 1297973 TTCACCCATTAGTGACTTGAGCTTCCGGACAATTTCCAAGTTGGTTTTAATAGGAAAATC 1297914 Query 160652 GGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCAT 160711 ||||||| | ||||||| ||||||||| | || |||| || |||||| ||| Sbjct 1297913 CATACCGCAGAGATTTATCAAGTACTTCCAGTCTGCCCTCATCCTGTAGAGGTCCTGCAT 1297854 Query 160712 GCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACT 160771 ||| || | || ||||| || |||||||| || |||||||| || |||| || | ||| Sbjct 1297853 GCAGTTGAGGTCGGCCTGAACCCGGCTCCACGAGGCGTACACCACACTCTCCAGCTGACT 1297794 Query 160772 GGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAACATCTT 160831 |||||| ||||| ||| ||| || ||| |||| |||| |||||| ||||| | Sbjct 1297793 GGCCACGAAGACATTACTGAAGCAGGACGCGATGCCCAGCACCGCGGCCAAGAAGGAATC 1297734 Query 160832 ATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAG 160891 || | |||| ||||||||| | ||| || | ||||| ||||||||||||||||| || Sbjct 1297733 CTCTGATTTTCTGTCCACGTGAATGCAGTAGAAATTCTGGGGCGCGTAGATGGCCCTCAG 1297674 Query 160892 CAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACTC 160951 | ||| || | ||| || || || ||||||| ||| ||||| || || || ||||| || Sbjct 1297673 GAGCCTGTCAAGCATTTCAATTTTGTGATGGACCACTATAGAATATGCGATGGGAAATTC 1297614 Query 160952 GGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAATCACA 161011 | ||| || ||| | || | || | || || |||| |||||| ||| | ||| Sbjct 1297613 TGCCTCTTCTTTACTAAAGGGCTGTGTGATATATTTGCGCGCCTTGATGAAAGCGTGACA 1297554 Query 161012 ATCCCGCGTCATGTTGATATAC 161033 ||| | |||||||| || ||| Sbjct 1297553 ATCTCTGGTCATGTTTATGTAC 1297532 >seq81 Length=8639600 Score = 163 bits (180), Expect = 3e-35 Identities = 210/290 (72%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 168153 AGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATG 168212 || || | ||| | | |||| || ||||| || || || || || |||||||||||| || Sbjct 6611951 AGGGTGAGGCAGGCTATTCCTGAGATCTTCCCAGAACCAAAAGTATTGAAGAGGCACTTG 6612010 Query 168213 AAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCC 168272 | || ||||| ||||||| |||||||||||| || || | |||||||| ||| || Sbjct 6612011 TAACACCCTTCATCCTCCAGGGTGGTATTCCAGAACGTGATGGTTGAGTTCTTGAGTTCC 6612070 Query 168273 AACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCG 168332 | || || ||||| | || ||||| | || || || ||||| || ||||||| | Sbjct 6612071 AGCTCAGTGATGTTTATCTTGTCCTTATAGGCGGGCTGGACCACAACCCCATGGTTCTTG 6612130 Query 168333 CTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGA 168392 ||||||||| ||||||| || ||||| | ||| || |||||||| || || |||| Sbjct 6612131 CTGAAGGTGACCATGTTTTCTGGGCTAACAGGCTTGATTTTCTGCCATGTCACAATCAAG 6612190 Query 168393 ACCTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAG 168442 || || | | | ||||| || ||||| | ||||| || |||||||| Sbjct 6612191 ACTTCCTCAGAATTTTGCAGAGAGCATCTTAAGGAAGCAGGTGTGTTCAG 6612240 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 167907 CCCAAATGTAGTACCTTGCATATCACCTCTCCGTTTCCTACTTGACTCTTTGGATCTTTT 167966 |||| || || |||| ||| | |||||| || || || |||||||| || ||||| Sbjct 6609289 CCCAGGTGAAGCACCTGGCAGACCACCTCC---TTCCCCACCTGACTCTTGGGGTCTTTG 6609345 Query 167967 ACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTGCGATGTAAAACGGTTTTCGTGCTG 168026 || || | | ||| || ||| ||| || |||||| | || | | | || ||| Sbjct 6609346 ACCTGAAGGACGCTCGTGACAGATGTGGTCCCATTGGGGTGGGAGAGAACCTCAGTACTG 6609405 Query 168027 TTCTCAATCCCTGATCCTGCCACCTTCCAGAATATTACAGGAGCGGGTCGTGCTGTAGCA 168086 || ||||||||||| || | |||||||||| | || ||||| || || || || | ||| Sbjct 6609406 TTGTCAATCCCTGACCCAGACACCTTCCAGGAGATCACAGGGGCTGGGCGGGCATTGGCA 6609465 Query 168087 GAGCAGGTAATATT 168100 ||||| || ||||| Sbjct 6609466 GAGCAAGTGATATT 6609479 >seq129 Length=6421872 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291 ||||| || |||| |||| || |||| |||||| | ||||| || |||| | || | Sbjct 700636 AGATACTTGGCTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCT 700577 Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351 ||||| || || |||||||||| || || || || | ||| | ||||| | | ||| Sbjct 700576 GGAATATAATTCTCATAATTTTCCCTAGATGGCCCCAGAACAACAGGTACAGAGCCAGCT 700517 Query 176352 AATAATGAGCGGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCT 176411 || || | |||| |||||||| |||||| || |||| |||||||||||||||| Sbjct 700516 AAAAAAGCATTATAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAAGAA 700457 Query 176412 AAATAGAACTTACA 176425 | |||||| || || Sbjct 700456 AGATAGAATTTGCA 700443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577163043787080