Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq133 86.0 7e-12 seq17 82.4 9e-11 >seq133 Length=6340249 Score = 86.0 bits (94), Expect = 7e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| ||||| || || || || ||||||||||| || | ||||| |||||| Sbjct 5009061 TCTCAGACAGAGACAGGTACCCCGTACATGCTTTACAAAGACTCCTGTAATCGGAAGAGC 5009120 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| ||||||||||||| || || || ||||| ||||| ||||||| Sbjct 5009121 AACCAGCAGAACCTGGGAACAATCAAATGCAGCAACCTGTGCACAGAAATAGTAGAGTAT 5009180 Query 76016 ACAGATAAGGATGAG 76030 || || |||||| Sbjct 5009181 ACCAGCAAAGATGAG 5009195 >seq17 Length=19722643 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 65443 AATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAG 65502 |||||||||||||||||||| || ||| || || |||||||| ||||||||||||||| Sbjct 6750892 AATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTTTGAGAAG 6750951 Query 65503 CGAGTTGGGGACTAT 65517 |||| || || ||| Sbjct 6750952 AGAGTAGGCGAGTAT 6750966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596511561235040